PDB entry 1x8u

View 1x8u on RCSB PDB site
Description: Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with Carboxymycobactin T
Class: antimicrobial protein
Keywords: lipocalin, siderophore
Deposited on 2004-08-18, released 2005-01-25
The last revision prior to the SCOP 1.73 freeze date was dated 2005-01-25, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.22
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: HOMO SAPIENS
    Gene: LCN2, NGAL, HNL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • engineered (86)
    Domains in SCOP 1.73: d1x8ua1
  • Chain 'B':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: HOMO SAPIENS
    Gene: LCN2, NGAL, HNL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • engineered (86)
    Domains in SCOP 1.73: d1x8ub1
  • Chain 'C':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: HOMO SAPIENS
    Gene: LCN2, NGAL, HNL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • engineered (86)
    Domains in SCOP 1.73: d1x8uc1
  • Heterogens: CM2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1x8uA (A:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >1x8uA (A:)
stsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedk
synvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvf
fkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1x8uB (B:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >1x8uB (B:)
dlipapplskvplqqnfqdnqfqgkwyvvglagnailrepqkmyatiyelkedksynvts
vlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkkvsq
nreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1x8uC (C:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >1x8uC (C:)
sdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedksy
nvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffk
kvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid