PDB entry 1x89

View 1x89 on RCSB PDB site
Description: Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with Carboxymycobactin S
Class: antimicrobial protein
Keywords: lipocalin, siderophore
Deposited on 2004-08-17, released 2005-01-25
The last revision prior to the SCOP 1.73 freeze date was dated 2005-01-25, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.22
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: HOMO SAPIENS
    Gene: LCN2, NGAL, HNL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • engineered (86)
    Domains in SCOP 1.73: d1x89a1
  • Chain 'B':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: HOMO SAPIENS
    Gene: LCN2, NGAL, HNL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • engineered (86)
    Domains in SCOP 1.73: d1x89b1
  • Chain 'C':
    Compound: Neutrophil gelatinase-associated lipocalin
    Species: HOMO SAPIENS
    Gene: LCN2, NGAL, HNL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80188
      • engineered (86)
    Domains in SCOP 1.73: d1x89c1
  • Heterogens: CM1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1x89A (A:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >1x89A (A:)
tsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedks
ynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvff
kkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1x89B (B:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >1x89B (B:)
tsdlipapplskvplqqnfqdnqfqgkwyvvglagnailrepqkmyatiyelkedksynv
tsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkkv
sqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1x89C (C:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg

    Sequence, based on observed residues (ATOM records): (download) 
    >1x89C (C:)
sdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedksy
nvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffk
kvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid