PDB entry 1wrd

View 1wrd on RCSB PDB site
Description: Crystal structure of Tom1 GAT domain in complex with ubiquitin
Class: protein transport/signaling protein
Keywords: three-helix bundle, ubiquitin-binding protein, protein transport-signaling protein complex
Deposited on 2004-10-14, released 2005-10-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.213
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Target of Myb protein 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O60784 (5-End)
      • cloning artifact (0-4)
    Domains in SCOPe 2.07: d1wrda1, d1wrda2
  • Chain 'B':
    Compound: Ubiquitin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1wrdb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1wrdA (A:)
    gplgseqigklrselemvsgnvrvmsemltelvptqaepadlellqelnrtcramqqrvl
    elipqianeqlteellivndnlnnvflrherferfrtgqttka
    

    Sequence, based on observed residues (ATOM records): (download)
    >1wrdA (A:)
    gplgseqigklrselemvsgnvrvmsemltelvptqaepadlellqelnrtcramqqrvl
    elipqianeqlteellivndnlnnvflrherferfrtg
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1wrdB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg