PDB entry 1wr6

View 1wr6 on RCSB PDB site
Description: Crystal structure of GGA3 GAT domain in complex with ubiquitin
Class: protein transport/signaling protein
Keywords: three-helix bundle, ubiquitin-binding protein, clathrin coat adaptor protein, PROTEIN TRANSPORT/SIGNALING PROTEIN COMPLEX
Deposited on 2004-10-12, released 2005-06-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.221
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ADP-ribosylation factor binding protein gga3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NZ52
      • modified residue (22)
      • modified residue (39)
    Domains in SCOPe 2.08: d1wr6a1
  • Chain 'B':
    Compound: ADP-ribosylation factor binding protein gga3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NZ52
      • modified residue (22)
      • modified residue (39)
    Domains in SCOPe 2.08: d1wr6b_
  • Chain 'C':
    Compound: ADP-ribosylation factor binding protein gga3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NZ52
      • modified residue (22)
      • modified residue (39)
    Domains in SCOPe 2.08: d1wr6c_
  • Chain 'D':
    Compound: ADP-ribosylation factor binding protein gga3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NZ52
      • modified residue (22)
      • modified residue (39)
    Domains in SCOPe 2.08: d1wr6d_
  • Chain 'E':
    Compound: Ubiquitin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1wr6e_
  • Chain 'F':
    Compound: Ubiquitin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1wr6f_
  • Chain 'G':
    Compound: Ubiquitin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1wr6g_
  • Chain 'H':
    Compound: Ubiquitin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1wr6h_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1wr6A (A:)
qkvtkrlhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklase
tedndnslgdilqasdnlsrvinsyktiiegqvingevatltlpdsegnsq

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6A (A:)
vtkrlhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklasete
dndnslgdilqasdnlsrvinsyktiiegq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1wr6B (B:)
qkvtkrlhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklase
tedndnslgdilqasdnlsrvinsyktiiegqvingevatltlpdsegnsq

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6B (B:)
lhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklasetedndn
slgdilqasdnlsrvinsyktiiegqving

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1wr6C (C:)
qkvtkrlhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklase
tedndnslgdilqasdnlsrvinsyktiiegqvingevatltlpdsegnsq

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6C (C:)
tkrlhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklaseted
ndnslgdilqasdnlsrvinsyktiiegqv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1wr6D (D:)
qkvtkrlhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklase
tedndnslgdilqasdnlsrvinsyktiiegqvingevatltlpdsegnsq

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6D (D:)
lhtleevnnnvrllsemllhysqedssdgdrelmkelfdqcenkrrtlfklasetedndn
slgdilqasdnlsrvinsyktiiegqvi

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1wr6E (E:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6E (E:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1wr6F (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6F (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1wr6G (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6G (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1wr6H (H:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1wr6H (H:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr