SCOPe 2.08: Structural Classification of Proteins

PDB entry 1wnd

View 1wnd on RCSB PDB site
Description: Escherichia coli YdcW gene product is a medium-chain aldehyde dehydrogenase as determined by kinetics and crystal structure
Class: oxidoreductase
Keywords: aldehyde dehydrogenase, NADH, fluorescence, kinetics, OXIDOREDUCTASE
Deposited on 2004-07-29, released 2004-10-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-12-28, with a file datestamp of 2016-12-22.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.08: d1wnda_
Chain 'B':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.08: d1wndb_
Chain 'C':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.08: d1wndc_
Chain 'D':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.08: d1wndd_
Heterogens: CA, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1wndA (A:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wndA (A:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh

Chain 'B':
Sequence, based on SEQRES records: (download)

>1wndB (B:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wndB (B:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh

Chain 'C':
Sequence, based on SEQRES records: (download)

>1wndC (C:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wndC (C:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh

Chain 'D':
Sequence, based on SEQRES records: (download)

>1wndD (D:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wndD (D:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh