SCOPe 2.07: Structural Classification of Proteins

PDB entry 1wnb

View 1wnb on RCSB PDB site
Description: Escherichia coli YdcW gene product is a medium-chain aldehyde dehydrogenase (complexed with nadh and betaine aldehyde)
Class: oxidoreductase
Keywords: aldehyde dehydrogenase, NADH, flurorescence, kinetics, OXIDOREDUCTASE
Deposited on 2004-07-29, released 2004-10-05
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-11-06, with a file datestamp of 2013-11-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.187
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.07: d1wnba_
Chain 'B':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.07: d1wnbb_
Chain 'C':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.07: d1wnbc_
Chain 'D':
Compound: Putative betaine aldehyde dehydrogenase
Species: Escherichia coli [TaxId:83333]
Database cross-references and differences (RAF-indexed):
- Uniprot P77674 (21-494)
  - conflict (217)
Domains in SCOPe 2.07: d1wnbd_
Heterogens: NAI, BTL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1wnbA (A:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wnbA (A:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh

Chain 'B':
Sequence, based on SEQRES records: (download)

>1wnbB (B:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wnbB (B:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh

Chain 'C':
Sequence, based on SEQRES records: (download)

>1wnbC (C:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wnbC (C:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh

Chain 'D':
Sequence, based on SEQRES records: (download)

>1wnbD (D:)
syyhhhhhhlestslykkaglmqhkllingelvsgegekqpvynpatgdvlleiaeasae
qvdaavraadaafaewgqttpkvraecllkladvieengqvfaelesrncgkplhsafnd
eipaivdvfrffagaarclnglaageyleghtsmirrdplgvvasiapwnyplmmaawkl
apalaagncvvlkpseitpltalklaelakdifpagvvnilfgrgktvgdpltghpkvrm
vsltgsiatgehiishtassikrthmelggkapvivfddadieavvegvrtfgyynagqd
ctaacriyaqkgiydtlveklgaavatlksgapddestelgplsslahlervgkaveeak
atghikvitggekrkgngyyyaptllagalqddaivqkevfgpvvsvtpfdneeqvvnwa
ndsqyglassvwtkdvgrahrvsarlqygctwvnthfmlvsemphggqklsgygkdmsly
gledytvvrhvmvkh

Sequence, based on observed residues (ATOM records): (download)

>1wnbD (D:)
mqhkllingelvsgegekqpvynpatgdvlleiaeasaeqvdaavraadaafaewgqttp
kvraecllkladvieengqvfaelesrncgkplhsafndeipaivdvfrffagaarclng
laageyleghtsmirrdplgvvasiapwnyplmmaawklapalaagncvvlkpseitplt
alklaelakdifpagvvnilfgrgktvgdpltghpkvrmvsltgsiatgehiishtassi
krthmelggkapvivfddadieavvegvrtfgyynagqdctaacriyaqkgiydtlvekl
gaavatlksgapddestelgplsslahlervgkaveeakatghikvitggekrkgngyyy
aptllagalqddaivqkevfgpvvsvtpfdneeqvvnwandsqyglassvwtkdvgrahr
vsarlqygctwvnthfmlvsemphggqklsgygkdmslygledytvvrhvmvkh