PDB entry 1wdk

View 1wdk on RCSB PDB site
Description: fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2)
Class: lyase,oxidoreductase/transferase
Keywords: alpha2beta2 heterotetrameric complex, LYASE, OXIDOREDUCTASE/TRANSFERASE COMPLEX, LYASE,OXIDOREDUCTASE/TRANSFERASE COMPLEX
Deposited on 2004-05-17, released 2004-07-27
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.203
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fatty oxidation complex alpha subunit
    Species: Pseudomonas fragi [TaxId:296]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1wdka1, d1wdka2, d1wdka3, d1wdka4
  • Chain 'B':
    Compound: Fatty oxidation complex alpha subunit
    Species: Pseudomonas fragi [TaxId:296]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1wdkb1, d1wdkb2, d1wdkb3, d1wdkb4
  • Chain 'C':
    Compound: 3-ketoacyl-CoA thiolase
    Species: Pseudomonas fragi [TaxId:296]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1wdkc1, d1wdkc2
  • Chain 'D':
    Compound: 3-ketoacyl-CoA thiolase
    Species: Pseudomonas fragi [TaxId:296]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1wdkd1, d1wdkd2
  • Heterogens: HG, ZN, ACO, NAD, N8E, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1wdkA (A:)
miyegkaitvtalesgivelkfdlkgesvnkfnrltlnelrqavdaikadasvkgvivss
gkdvfivgaditefvenfklpdaeliagnleankifsdfedlnvptvaaingialgggle
mclaadfrvmadsakiglpevklgiypgfggtvrlprligvdnavewiasgkenraedal
kvsavdavvtadklgaaaldlikraisgeldykakrqpkleklklnaieqmmafetakgf
vagqagpnypapveaiktiqkaanfgrdkaleveaagfaklaktsasncliglflndqel
kkkakvydkiakdvkqaavlgagimgggiayqsaskgtpilmkdinehgieqglaeaakl
lvgrvdkgrmtpakmaevlngirptlsygdfgnvdlvveavvenpkvkqavlaevenhvr
edailasntstisisllakalkrpenfvgmhffnpvhmmplvevirgekssdlavattva
yakkmgknpivvndcpgflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpayl
mdvvgidtghhgrdvmaegfpdrmkddrrsaidalyeakrlgqkngkgfyayeadkkgkq
kklvdssvlevlkpivyeqrdvtdediinwmmiplcletvrcledgivetaaeadmglvy
gigfplfrggalryidsigvaefvaladqyaelgalyhptaklremakngqsffg

    Sequence, based on observed residues (ATOM records): (download) 
    >1wdkA (A:)
miyegkaitvtalesgivelkfdlkgesvnkfnrltlnelrqavdaikadasvkgvivss
gkdvfivgaditefvenfklpdaeliagnleankifsdfedlnvptvaaingialgggle
mclaadfrvmadsakiglpevklgiypgfggtvrlprligvdnavewiasgkenraedal
kvsavdavvtadklgaaaldlikraisgeldykakrqpkleklklnaieqmmafetakgf
vagqagpnypapveaiktiqkaanfgrdkaleveaagfaklaktsasncliglflndqel
kkkakvydkiakdvkqaavlgagimgggiayqsaskgtpilmkdinehgieqglaeaakl
lvgrvdkgrmtpakmaevlngirptlsygdfgnvdlvveavvenpkvkqavlaevenhvr
edailasntstisisllakalkrpenfvgmhffnpvhmmplvevirgekssdlavattva
yakkmgknpivvndcpgflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpayl
mdvvgidtghhgrdvmaegfpdrmkddrrsaidalyeakrlgqkngkgfyayekklvdss
vlevlkpivyeqrdvtdediinwmmiplcletvrcledgivetaaeadmglvygigfplf
rggalryidsigvaefvaladqyaelgalyhptaklremakngqsffg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1wdkB (B:)
miyegkaitvtalesgivelkfdlkgesvnkfnrltlnelrqavdaikadasvkgvivss
gkdvfivgaditefvenfklpdaeliagnleankifsdfedlnvptvaaingialgggle
mclaadfrvmadsakiglpevklgiypgfggtvrlprligvdnavewiasgkenraedal
kvsavdavvtadklgaaaldlikraisgeldykakrqpkleklklnaieqmmafetakgf
vagqagpnypapveaiktiqkaanfgrdkaleveaagfaklaktsasncliglflndqel
kkkakvydkiakdvkqaavlgagimgggiayqsaskgtpilmkdinehgieqglaeaakl
lvgrvdkgrmtpakmaevlngirptlsygdfgnvdlvveavvenpkvkqavlaevenhvr
edailasntstisisllakalkrpenfvgmhffnpvhmmplvevirgekssdlavattva
yakkmgknpivvndcpgflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpayl
mdvvgidtghhgrdvmaegfpdrmkddrrsaidalyeakrlgqkngkgfyayeadkkgkq
kklvdssvlevlkpivyeqrdvtdediinwmmiplcletvrcledgivetaaeadmglvy
gigfplfrggalryidsigvaefvaladqyaelgalyhptaklremakngqsffg

    Sequence, based on observed residues (ATOM records): (download) 
    >1wdkB (B:)
miyegkaitvtalesgivelkfdlkgesvnkfnrltlnelrqavdaikadasvkgvivss
gkdvfivgaditefvenfklpdaeliagnleankifsdfedlnvptvaaingialgggle
mclaadfrvmadsakiglpevklgiypgfggtvrlprligvdnavewiasgkenraedal
kvsavdavvtadklgaaaldlikraisgeldykakrqpkleklklnaieqmmafetakgf
vagqagpnypapveaiktiqkaanfgrdkaleveaagfaklaktsasncliglflndqel
kkkakvydkiakdvkqaavlgagimgggiayqsaskgtpilmkdinehgieqglaeaakl
lvgrvdkgrmtpakmaevlngirptlsygdfgnvdlvveavvenpkvkqavlaevenhvr
edailasntstisisllakalkrpenfvgmhffnpvhmmplvevirgekssdlavattva
yakkmgknpivvndcpgflvnrvlfpyfggfaklvsagvdfvridkvmekfgwpmgpayl
mdvvgidtghhgrdvmaegfpdrmkddrrsaidalyeakrlgqkngkgfyayeadqkklv
dssvlevlkpivyeqrdvtdediinwmmiplcletvrcledgivetaaeadmglvygigf
plfrggalryidsigvaefvaladqyaelgalyhptaklremakngqsffg

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1wdkC (C:)
slnprdvvivdfgrtpmgrskggmhrntraedmsahliskvlernskvdpgevedviwgc
vnqtleqgwniarmaslmtqiphtsaaqtvsrlcgssmsalhtaaqaimtgngdvfvvgg
vehmghvsmmhgvdpnphmslyaakasgmmgltaemlgkmhgisreqqdafavrshqlah
katvegkfkdeiipmqgydengflkifdydetirpdttleslaalkpafnpkggtvtagt
ssqitdgascmivmsaqrakdlgleplavirsmavagvdpaimgygpvpatqkalkragl
nmadidfielneafaaqalpvlkdlkvldkmnekvnlhggaialghpfgcsgarisgtll
nvmkqnggtfglstmciglgqgiatvferv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1wdkD (D:)
slnprdvvivdfgrtpmgrskggmhrntraedmsahliskvlernskvdpgevedviwgc
vnqtleqgwniarmaslmtqiphtsaaqtvsrlcgssmsalhtaaqaimtgngdvfvvgg
vehmghvsmmhgvdpnphmslyaakasgmmgltaemlgkmhgisreqqdafavrshqlah
katvegkfkdeiipmqgydengflkifdydetirpdttleslaalkpafnpkggtvtagt
ssqitdgascmivmsaqrakdlgleplavirsmavagvdpaimgygpvpatqkalkragl
nmadidfielneafaaqalpvlkdlkvldkmnekvnlhggaialghpfgcsgarisgtll
nvmkqnggtfglstmciglgqgiatvferv