PDB entry 1w8j

View 1w8j on RCSB PDB site
Description: crystal structure of myosin v motor domain -nucleotide-free
Class: motor protein
Keywords: motor protein, unconventional myosin, myosin v, chicken, molecular motor, ATPase, elc, iq motif, muscle protein, ATP-binding motor protein
Deposited on 2004-09-22, released 2005-02-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.2574
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: myosin va
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w8ja1, d1w8ja2
  • Chain 'B':
    Compound: myosin va
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w8jb1, d1w8jb2
  • Chain 'C':
    Compound: myosin va
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w8jc1, d1w8jc2
  • Chain 'D':
    Compound: myosin va
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w8jd1, d1w8jd2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1w8jA (A:)
maaselytkyarvwipdpeevwksaellkdykpgdkvlqlrleegkdleycldpktkelp
plrnpdilvgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiyg
ediinaysgqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryf
atvsgsaseanveekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmr
tylleksrvvfqaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgid
dakemvntrqactllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltif
cdlmgvdyeemahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvn
kalhstvkqhsfigvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymke
qipwtlidfydnqpcinlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfek
prlsnkafiikhfadkveyqcegfleknkdtvyeeqikvlksskkfkllpelfqdeekai
sptsatpsgrvplsrtpvkpakarpgqtskehkktvghqfrnslhllmetlnattphyvr
cikpndfkfpftfdekravqqlracgvletirisaagfpsrwtyqeffsryrvlmkqkdv
lsdrkqtcknvleklildkdkyqfgktkiffragqvaylekiradk

    Sequence, based on observed residues (ATOM records): (download) 
    >1w8jA (A:)
aaselytkyarvwipdpeevwksaellkdykpgdkvlqlrldleycldpktkelpplrnp
dilvgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiygediin
aysgqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryfatvsn
veekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmrtylleksrvvf
qaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgiddakemvntrqa
ctllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltifcdlmgvdyeem
ahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvnkalhstvkqhs
figvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymkeqipwtlidfyd
nqpcinlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfekprlsnkafiik
hfadkveyqcegfleknkdtvyeeqikvlksskkfkllpelfqtskehkktvghqfrnsl
hllmetlnattphyvrcikpndfkfpftfdekravqqlracgvletirisaagfpsrwty
qeffsryrvlmkqkdvlsdrkqtcknvleklildkdkyqfgktkiffragqvaylekira
dk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1w8jB (B:)
maaselytkyarvwipdpeevwksaellkdykpgdkvlqlrleegkdleycldpktkelp
plrnpdilvgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiyg
ediinaysgqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryf
atvsgsaseanveekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmr
tylleksrvvfqaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgid
dakemvntrqactllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltif
cdlmgvdyeemahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvn
kalhstvkqhsfigvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymke
qipwtlidfydnqpcinlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfek
prlsnkafiikhfadkveyqcegfleknkdtvyeeqikvlksskkfkllpelfqdeekai
sptsatpsgrvplsrtpvkpakarpgqtskehkktvghqfrnslhllmetlnattphyvr
cikpndfkfpftfdekravqqlracgvletirisaagfpsrwtyqeffsryrvlmkqkdv
lsdrkqtcknvleklildkdkyqfgktkiffragqvaylekiradk

    Sequence, based on observed residues (ATOM records): (download) 
    >1w8jB (B:)
maaselytkyarvwipdpeevwksaellkdykpgdkvlqlrldleycldpktkelpplrn
pdilvgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiygedii
naysgqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryfatvs
nveekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmrtylleksrvv
fqaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgiddakemvntrq
actllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltifcdlmgvdyee
mahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvnkalhstvkqh
sfigvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymkeqipwtlidfy
dnqpcinlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfekprlsnkafii
khfadkveyqcegfleknkdtvyeeqikvlksskkfkllpelfqtskehkktvghqfrns
lhllmetlnattphyvrcikpndfkfpftfdekravqqlracgvletirisaagfpsrwt
yqeffsryrvlmkdvlsdrkqtcknvleklildkdkyqfgktkiffragqvaylekira

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1w8jC (C:)
maaselytkyarvwipdpeevwksaellkdykpgdkvlqlrleegkdleycldpktkelp
plrnpdilvgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiyg
ediinaysgqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryf
atvsgsaseanveekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmr
tylleksrvvfqaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgid
dakemvntrqactllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltif
cdlmgvdyeemahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvn
kalhstvkqhsfigvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymke
qipwtlidfydnqpcinlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfek
prlsnkafiikhfadkveyqcegfleknkdtvyeeqikvlksskkfkllpelfqdeekai
sptsatpsgrvplsrtpvkpakarpgqtskehkktvghqfrnslhllmetlnattphyvr
cikpndfkfpftfdekravqqlracgvletirisaagfpsrwtyqeffsryrvlmkqkdv
lsdrkqtcknvleklildkdkyqfgktkiffragqvaylekiradk

    Sequence, based on observed residues (ATOM records): (download) 
    >1w8jC (C:)
maaselytkyarvwipdpeevwksaellkdykpgdkvlqlrldleycldpktkelpplrn
pdilvgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiygedii
naysgqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryfatvs
nveekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmrtylleksrvv
fqaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgiddakemvntrq
actllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltifcdlmgvdyee
mahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvnkalhstvkqh
sfigvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymkeqipwtlidfy
dnqpcinlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfekprlsnkafii
khfadkveyqcegfleknkdtvyeeqikvlksskkfkllpelfqtskehkktvghqfrns
lhllmetlnattphyvrcikpndfkfpftfdekravqqlracgvletirisaagfpsrwt
yqeffsryrvlmkqkdvlsdrkqtcknvleklildkdkyqfgktkiffragqvaylekir
adk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1w8jD (D:)
maaselytkyarvwipdpeevwksaellkdykpgdkvlqlrleegkdleycldpktkelp
plrnpdilvgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiyg
ediinaysgqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryf
atvsgsaseanveekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmr
tylleksrvvfqaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgid
dakemvntrqactllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltif
cdlmgvdyeemahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvn
kalhstvkqhsfigvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymke
qipwtlidfydnqpcinlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfek
prlsnkafiikhfadkveyqcegfleknkdtvyeeqikvlksskkfkllpelfqdeekai
sptsatpsgrvplsrtpvkpakarpgqtskehkktvghqfrnslhllmetlnattphyvr
cikpndfkfpftfdekravqqlracgvletirisaagfpsrwtyqeffsryrvlmkqkdv
lsdrkqtcknvleklildkdkyqfgktkiffragqvaylekiradk

    Sequence, based on observed residues (ATOM records): (download) 
    >1w8jD (D:)
elytkyarvwipdpeevwksaellkdykpgdkvlqlrldleycldpktkelpplrnpdil
vgendltalsylhepavlhnlkvrfidskliytycgivlvainpyeqlpiygediinays
gqnmgdmdphifavaeeaykqmardernqsiivsgesgagktvsakyamryfatvsgsan
veekvlasnpimesignakttrndnssrfgkyieigfdkryriiganmrtylleksrvvf
qaeeernyhifyqlcasaalpefktlrlgnanyfhytkqggspvidgiddakemvntrqa
ctllgisdsyqmgifrilagilhlgnvefasrdsdscaippkhdpltifcdlmgvdyeem
ahwlchrklatatetyikpisklhainardalakhiyanlfnwivdhvnkalhstvkqhs
figvldiygfetfeinsfeqfcinyaneklqqqfnmhvfkleqeeymkeqipdfydnqpc
inlieakmgvldlldeeckmpkgsddtwaqklynthlnkcalfekprlsnkafiikhfad
kveyqcegfleknkdtvyeeqikvlksskkfkllpelftskehkktvghqfrnslhllme
tlnattphyvrcikpndfkfpftfdekravqqlracgvletirisaagfpsrwtyqeffs
ryrvlmkqkdvlsdrkqtcknvleklildkdkyqfgktkiffragqvaylekiradk