PDB entry 1w5d

View 1w5d on RCSB PDB site
Description: crystal structure of pbp4a from bacillus subtilis
Class: hydrolase
Keywords: penicillin-binding protein, d-ala-d-ala-carboxypeptidase, peptidoglycan, bacillus subtilis, beta-lactam, hydrolase, peptidoglycan synthesis
Deposited on 2004-08-06, released 2005-12-07
The last revision prior to the SCOP 1.75 freeze date was dated 2007-07-03, with a file datestamp of 2007-06-29.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.224
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein
    Species: Bacillus subtilis
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1w5da1
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1w5dA (A:)
aekqdalsgqidkiladhpalegamagitvrsaetgavlyehsgdtrmrpasslklltaa
aalsvlgenysfttevrtdgtlkgkklngnlylkgkgdptllpsdfdkmaeilkhsgvkv
ikgnligddtwhddmrlspdmpwsdeytyygapisaltaspnedydagtvivevtpnqke
geepavsvspktdyitikndakttaagsekdltierehgtntitiegsvpvdanktkewi
svwepagyaldlfkqslkkqgitvkgdiktgeapsssdvllshrsmplsklfvpfmklsn
nghaevlvkemgkvkkgegswekglevlnstlpefgvdskslvlrdgsgishidavssdq
lsqllydiqdqswfsaylnslpvagnpdrmvggtlrnrmkgtpaqgkvraktgslstvss
lsgyaetksgkklvfsillnglideedgkdiedqiavilanq

    Sequence, based on observed residues (ATOM records): (download) 
    >1w5dA (A:)
dalsgqidkiladhpalegamagitvrsaetgavlyehsgdtrmrpasslklltaaaals
vlgenysfttevrtdgtlkgkklngnlylkgkgdptllpsdfdkmaeilkhsgvkvikgn
ligddtwhddmrlspdmpwsdeytyygapisaltaspnedydagtvivevtpnqkegeep
avsvspktdyitikndakttaagsekdltierehgtntitiegsvpvdanktkewisvwe
pagyaldlfkqslkkqgitvkgdiktgeapsssdvllshrsmplsklfvpfmklsnngha
evlvkemgkvkkgegswekglevlnstlpefgvdskslvlrdgsgishidavssdqlsql
lydiqdqswfsaylnslpvagnpdrmvggtlrnrmkgtpaqgkvraktgslstvsslsgy
aetksgkklvfsillnglideedgkdiedqiavilanq