PDB entry 1w5d

View 1w5d on RCSB PDB site
Description: crystal structure of pbp4a from bacillus subtilis
Class: hydrolase
Keywords: penicillin-binding protein, d-ala-d-ala-carboxypeptidase, peptidoglycan, bacillus subtilis, beta-lactam, hydrolase, peptidoglycan synthesis
Deposited on 2004-08-06, released 2005-12-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.224
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1w5da1
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1w5dA (A:)
    aekqdalsgqidkiladhpalegamagitvrsaetgavlyehsgdtrmrpasslklltaa
    aalsvlgenysfttevrtdgtlkgkklngnlylkgkgdptllpsdfdkmaeilkhsgvkv
    ikgnligddtwhddmrlspdmpwsdeytyygapisaltaspnedydagtvivevtpnqke
    geepavsvspktdyitikndakttaagsekdltierehgtntitiegsvpvdanktkewi
    svwepagyaldlfkqslkkqgitvkgdiktgeapsssdvllshrsmplsklfvpfmklsn
    nghaevlvkemgkvkkgegswekglevlnstlpefgvdskslvlrdgsgishidavssdq
    lsqllydiqdqswfsaylnslpvagnpdrmvggtlrnrmkgtpaqgkvraktgslstvss
    lsgyaetksgkklvfsillnglideedgkdiedqiavilanq
    

    Sequence, based on observed residues (ATOM records): (download)
    >1w5dA (A:)
    dalsgqidkiladhpalegamagitvrsaetgavlyehsgdtrmrpasslklltaaaals
    vlgenysfttevrtdgtlkgkklngnlylkgkgdptllpsdfdkmaeilkhsgvkvikgn
    ligddtwhddmrlspdmpwsdeytyygapisaltaspnedydagtvivevtpnqkegeep
    avsvspktdyitikndakttaagsekdltierehgtntitiegsvpvdanktkewisvwe
    pagyaldlfkqslkkqgitvkgdiktgeapsssdvllshrsmplsklfvpfmklsnngha
    evlvkemgkvkkgegswekglevlnstlpefgvdskslvlrdgsgishidavssdqlsql
    lydiqdqswfsaylnslpvagnpdrmvggtlrnrmkgtpaqgkvraktgslstvsslsgy
    aetksgkklvfsillnglideedgkdiedqiavilanq