PDB entry 1w2w

View 1w2w on RCSB PDB site
Description: Crystal structure of yeast Ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eIF2B subunits
Class: isomerase
Keywords: isomerase, eif2b, methionine salvage pathway, translation initiation, oxidoreductase
Deposited on 2004-07-09, released 2004-07-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-08, with a file datestamp of 2019-05-03.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.1
  • Chain 'B':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.1
  • Chain 'E':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.2
  • Chain 'F':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.2
  • Chain 'I':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.3
  • Chain 'J':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.3
  • Chain 'M':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.4
  • Chain 'N':
    Compound: 5-methylthioribose-1-phosphate isomerase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1w2w.4
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w2wA (A:)
msleaivfdrsepenvsvkvldqlllpyttkyvpihtiddgysviksmqvrgapaiaivg
slsvltevqlikhnptsdvatlyslvnwestktvlnkrldfllssrptavnlsnslveik
nilksssdlkafdgslynyvcelidedlannmkmgdngakylidvlqkdgfkdefavlti
cntgslatsgygtalgvirslwkdslaktdk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w2wB (B:)
cprmghvfpletrpynqgsrltayelvydkipstlitdssiayrirtspipikaafvgad
rivrngdtankigtlqlavickqfgikffvvapkttidnvtetgddiiveernpeefkvv
tgtvinpengslilnesgepitgkvgiapleinvwnpafditphelidgiiteegvftkn
ssgefqleslf

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w2wE (E:)
msleaivfdrsepenvsvkvldqlllpyttkyvpihtiddgysviksmqvrgapaiaivg
slsvltevqlikhnptsdvatlyslvnwestktvlnkrldfllssrptavnlsnslveik
nilksssdlkafdgslynyvcelidedlannmkmgdngakylidvlqkdgfkdefavlti
cntgslatsgygtalgvirslwkdslaktdk

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w2wF (F:)
cprmghvfpletrpynqgsrltayelvydkipstlitdssiayrirtspipikaafvgad
rivrngdtankigtlqlavickqfgikffvvapkttidnvtetgddiiveernpeefkvv
tgtvinpengslilnesgepitgkvgiapleinvwnpafditphelidgiiteegvftkn
ssgefqleslf

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w2wI (I:)
msleaivfdrsepenvsvkvldqlllpyttkyvpihtiddgysviksmqvrgapaiaivg
slsvltevqlikhnptsdvatlyslvnwestktvlnkrldfllssrptavnlsnslveik
nilksssdlkafdgslynyvcelidedlannmkmgdngakylidvlqkdgfkdefavlti
cntgslatsgygtalgvirslwkdslaktdk

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w2wJ (J:)
cprmghvfpletrpynqgsrltayelvydkipstlitdssiayrirtspipikaafvgad
rivrngdtankigtlqlavickqfgikffvvapkttidnvtetgddiiveernpeefkvv
tgtvinpengslilnesgepitgkvgiapleinvwnpafditphelidgiiteegvftkn
ssgefqleslf

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >1w2wM (M:)
msleaivfdrsepenvsvkvldqlllpyttkyvpihtiddgysviksmqvrgapaiaivg
slsvltevqlikhnptsdvatlyslvnwestktvlnkrldfllssrptavnlsnslveik
nilksssdlkafdgslynyvcelidedlannmkmgdngakylidvlqkdgfkdefavlti
cntgslatsgygtalgvirslwkdslaktdk

    Sequence, based on observed residues (ATOM records): (download) 
    >1w2wM (M:)
sleaivfdrsepenvsvkvldqlllpyttkyvpihtiddgysviksmqvrgapaiaivgs
lsvltevqlikhnptsdvatlyslvnwestktvlnkrldfllssrptavnlsnslveikn
ilksssdlkafdgslynyvcelidedlannmkmgdngakylidvlqkdgfkdefavltic
ntgslatsgygtalgvirslwkdslaktdk

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1w2wN (N:)
cprmghvfpletrpynqgsrltayelvydkipstlitdssiayrirtspipikaafvgad
rivrngdtankigtlqlavickqfgikffvvapkttidnvtetgddiiveernpeefkvv
tgtvinpengslilnesgepitgkvgiapleinvwnpafditphelidgiiteegvftkn
ssgefqleslf