PDB entry 1w25

View 1w25 on RCSB PDB site
Description: Response regulator PleD in complex with c-diGMP
Class: signaling protein
Keywords: two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp, allosteric product inhibition, phosphorylation, signaling protein
Deposited on 2004-06-28, released 2004-11-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-29, with a file datestamp of 2019-05-24.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: stalked-cell differentiation controlling protein
    Species: CAULOBACTER VIBRIOIDES [TaxId:190650]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9A5I5 (0-452)
      • expression tag (453)
    Domains in SCOPe 2.08: d1w25a1, d1w25a2, d1w25a3, d1w25a4
  • Chain 'B':
    Compound: stalked-cell differentiation controlling protein
    Species: CAULOBACTER VIBRIOIDES [TaxId:190650]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9A5I5 (0-452)
      • expression tag (453)
    Domains in SCOPe 2.08: d1w25b1, d1w25b2, d1w25b3, d1w25b4
  • Heterogens: ZN, MG, C2E, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1w25A (A:)
    sarilvvddieanvrlleakltaeyyevstamdgptalamaardlpdiilldvmmpgmdg
    ftvcrklkddpttrhipvvlitaldgrgdriqglesgasdfltkpiddvmlfarvrsltr
    fklvidelrqreasgrrmgviagaaarldglggrvlivddnerqaqrvaaelgvehrpvi
    esdpekakisaggpvdlvivnaaaknfdglrftaalrseertrqlpvlamvdpddrgrmv
    kaleigvndilsrpidpqelsarvktqiqrkrytdylrnnldhslelavtdqltglhnrr
    ymtgqldslvkratlggdpvsallididffkkindtfghdigdevlrefalrlasnvrai
    dlpcryggeefvvimpdtaladalriaerirmhvsgspftvahgremlnvtisigvsata
    gegdtpeallkradegvyqakasgrnavvgkaahhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1w25A (A:)
    sarilvvddieanvrlleakltaeyyevstamdgptalamaardlpdiilldvmmpgmdg
    ftvcrklkddpttrhipvvlitaldgrgdriqglesgasdfltkpiddvmlfarvrsltr
    fklvidelrqreasgrrmgviagaaarldglggrvlivddnerqaqrvaaelgvehrpvi
    esdpekakisaggpvdlvivnaaaknfdglrftaalrseertrqlpvlamvdpddrgrmv
    kaleigvndilsrpidpqelsarvktqiqrkrytdylrnnldhslelavtdqltglhnrr
    ymtgqldslvkratlggdpvsallididffkkindtfghdigdevlrefalrlasnvrai
    dlpcryggeefvvimpdtaladalriaerirmhvsgspftvahgremlnvtisigvsata
    gegdtpeallkradegvyqakasgrnavvgkaah
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1w25B (B:)
    sarilvvddieanvrlleakltaeyyevstamdgptalamaardlpdiilldvmmpgmdg
    ftvcrklkddpttrhipvvlitaldgrgdriqglesgasdfltkpiddvmlfarvrsltr
    fklvidelrqreasgrrmgviagaaarldglggrvlivddnerqaqrvaaelgvehrpvi
    esdpekakisaggpvdlvivnaaaknfdglrftaalrseertrqlpvlamvdpddrgrmv
    kaleigvndilsrpidpqelsarvktqiqrkrytdylrnnldhslelavtdqltglhnrr
    ymtgqldslvkratlggdpvsallididffkkindtfghdigdevlrefalrlasnvrai
    dlpcryggeefvvimpdtaladalriaerirmhvsgspftvahgremlnvtisigvsata
    gegdtpeallkradegvyqakasgrnavvgkaahhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1w25B (B:)
    sarilvvddieanvrlleakltaeyyevstamdgptalamaardlpdiilldvmmpgmdg
    ftvcrklkddpttrhipvvlitaldgrgdriqglesgasdfltkpiddvmlfarvrsltr
    fklvidelrqreasgrrmgviagaaarldglggrvlivddnerqaqrvaaelgvehrpvi
    esdpekakisaggpvdlvivnaaaknfdglrftaalrseertrqlpvlamvdpddrgrmv
    kaleigvndilsrpidpqelsarvktqiqrkrytdylrnnldhslelavtdqltglhnrr
    ymtgqldslvkratlggdpvsallididffkkindtfghdigdevlrefalrlasnvrai
    dlpcryggeefvvimpdtaladalriaerirmhvsgspftvahgremlnvtisigvsata
    gegdtpeallkradegvyqakasgrnavvgkaah