PDB entry 1vyo
View 1vyo on RCSB PDB site
Description: crystal structure of avidin
Class: glycoprotein
Keywords: glycoprotein, biotin
Deposited on
2004-05-03, released
2005-07-20
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.48 Å
R-factor: 0.167
AEROSPACI score: 0.67
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1vyoa_ - Chain 'B':
Compound: Avidin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1vyob_ - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vyoA (A:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>1vyoA (A:)
kcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrtqp
tfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginiftr
l
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1vyoB (B:)
arkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrt
qptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginif
trlrtqke
Sequence, based on observed residues (ATOM records): (download)
>1vyoB (B:)
rkcsltgkwtndlgsnmtigavnsrgeftgtyitavtatsneikesplhgtqntinkrtq
ptfgftvnwkfsesttvftgqcfidrngkevlktmwllrssvndigddwkatrvginift
rl