PDB entry 1vwj

View 1vwj on RCSB PDB site
Description: streptavidin-cyclo-[5-s-valeramide-hpqgppc]k-nh2, ph 2.5, i222 complex
Class: complex (biotin-binding protein/peptide)
Keywords: COMPLEX (BIOTIN-BINDING PROTEIN-PEPTIDE), LINEAR THIOETHER-CONTAINING PEPTIDE ENGINEERED, COMPLEX (BIOTIN-BINDING PROTEIN-PEPTIDE) complex
Deposited on 1997-03-03, released 1998-03-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.207
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vwjb_
  • Chain 'D':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vwjd_
  • Chain 'M':
    Compound: peptide ligand containing hpq
    Species: Bothrops insularis [TaxId:8723]
    Database cross-references and differences (RAF-indexed):
    • PDB 1VWJ (0-End)
  • Chain 'P':
    Compound: peptide ligand containing hpq
    Species: Bothrops insularis [TaxId:8723]
    Database cross-references and differences (RAF-indexed):
    • PDB 1VWJ (0-End)
  • Heterogens: LEA, HOH

PDB Chain Sequences:

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vwjB (B:)
aeagitgtwynqlgstfivtagadgaltgtyesavgnaesryvltgrydsapatdgsgta
lgwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1vwjD (D:)
aeagitgtwynqlgstfivtagadgaltgtyesavgnaesryvltgrydsapatdgsgta
lgwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkp

    Sequence, based on observed residues (ATOM records): (download) 
    >1vwjD (D:)
aeagitgtwynqlgstfivtagadgaltgtyesavgnaesryvltgrydsapatdgsgta
lgwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
v

  • Chain 'M':
    No sequence available.

  • Chain 'P':
    No sequence available.