PDB entry 1vsj
View 1vsj on RCSB PDB site
Description: asv integrase core domain with cd(II) cofactors
Class: endonuclease
Keywords: endonuclease, hydrolase, endoribonuclease, RNA-directed DNA polymerase
Deposited on
1997-03-04, released
1997-05-15
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-12.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.175
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: integrase
Species: Rous sarcoma virus (strain Schmidt-Ruppin) [TaxId:11889]
Database cross-references and differences (RAF-indexed):
- Uniprot P03354 (4-149)
- variant (51)
- modified residue (75)
- variant (116)
Domains in SCOPe 2.06: d1vsja_ - Heterogens: CD, EPE, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vsjA (A:)
plreglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvaaqhhwatai
avlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirv
laegdgfmkriptskqgellakamyalnhfnl
Sequence, based on observed residues (ATOM records): (download)
>1vsjA (A:)
glgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvaaqhhwataiavlg
rpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirvlaeg
dgfmkriptskqgellakamyalnhf