PDB entry 1vq1
View 1vq1 on RCSB PDB site
Description: Crystal structure of N5-glutamine methyltransferase, HemK(EC 2.1.1.-) (TM0488) from Thermotoga maritima at 2.80 A resolution
Class: transferase
Keywords: TM0488, N5-glutamine methyltransferase, HEMK(EC 2.1.1.-), Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI
Deposited on
2004-12-02, released
2005-02-01
The last revision prior to the SCOP 1.73 freeze date was dated
2006-10-24, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.212
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: N5-glutamine methyltransferase, HemK
Species: Thermotoga maritima MSB8
Gene: TM0488
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYV8 (Start-293)
- modified residue (100)
- modified residue (204)
- modified residue (256)
Domains in SCOP 1.73: d1vq1a1 - Chain 'B':
Compound: N5-glutamine methyltransferase, HemK
Species: Thermotoga maritima MSB8
Gene: TM0488
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYV8 (Start-293)
- modified residue (100)
- modified residue (204)
- modified residue (256)
Domains in SCOP 1.73: d1vq1b1 - Heterogens: SAM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vq1A (A:)
mgsdkihhhhhhmdtrknvsgaerkiwslirdcsgklegvtetsvlevllivsrvlgirk
edlflkdlgvspteekrilelvekrasgyplhyilgekefmglsflveegvfvprpetee
lvelalelirkygiktvadigtgsgaigvsvakfsdaivfatdvsskaveiarknaerhg
vsdrffvrkgeflepfkekfasiemilsnppyvkssahlpkdvlfeppealfggedgldf
yreffgrydtsgkivlmeigedqveelkkivsdtvflkdsagkyrflllnrrss
Sequence, based on observed residues (ATOM records): (download)
>1vq1A (A:)
rkiwslirdcsgklegvtetsvlevllivsrvlgirkedlflkdlgvspteekrilelve
krasgyplhyilgekefmglsflveegvfvprpeteelvelalelirkygiktvadigtg
sgaigvsvakfsdaivfatdvsskaveiarknaerhgvsdrffvrkgeflepfkekfasi
emilsnppyvkssahlfeppealfggedgldfyreffgrydtsgkivlmeigedqveelk
kivsdtvflkdsagkyrflllnrrss
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1vq1B (B:)
mgsdkihhhhhhmdtrknvsgaerkiwslirdcsgklegvtetsvlevllivsrvlgirk
edlflkdlgvspteekrilelvekrasgyplhyilgekefmglsflveegvfvprpetee
lvelalelirkygiktvadigtgsgaigvsvakfsdaivfatdvsskaveiarknaerhg
vsdrffvrkgeflepfkekfasiemilsnppyvkssahlpkdvlfeppealfggedgldf
yreffgrydtsgkivlmeigedqveelkkivsdtvflkdsagkyrflllnrrss
Sequence, based on observed residues (ATOM records): (download)
>1vq1B (B:)
rkiwslirdcsgklegvtetsvlevllivsrvlgirkedlflkdlgvspteekrilelve
krasgyplhyilgekefmglsflveegvfvprpeteelvelalelirkygiktvadigtg
sgaigvsvakfsdaivfatdvsskaveiarknaerhgvsdrffvrkgeflepfkekfasi
emilsnppyvksslfeppealfggedgldfyreffgrydtsgkivlmeigedqveelkki
vsdtvflkdsagkyrflllnrrss