SCOPe 2.06: Structural Classification of Proteins

PDB entry 1vpx

View 1vpx on RCSB PDB site
Description: Crystal structure of Transaldolase (EC 2.2.1.2) (TM0295) from Thermotoga maritima at 2.40 A resolution
Class: transferase
Keywords: TM0295, TRANSALDOLASE (EC 2.2.1.2), Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, TRANSFERASE
Deposited on 2004-11-23, released 2004-12-07
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.199
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxa1, d1vpxa2
Chain 'B':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxb1, d1vpxb2
Chain 'C':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxc1, d1vpxc2
Chain 'D':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxd1, d1vpxd2
Chain 'E':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxe1, d1vpxe2
Chain 'F':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxf1, d1vpxf2
Chain 'G':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxg1, d1vpxg2
Chain 'H':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxh1, d1vpxh2
Chain 'I':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxi1, d1vpxi2
Chain 'J':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxj1, d1vpxj2
Chain 'K':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxk1, d1vpxk2
Chain 'L':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxl1, d1vpxl2
Chain 'M':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxm1, d1vpxm2
Chain 'N':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxn1, d1vpxn2
Chain 'O':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxo1, d1vpxo2
Chain 'P':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxp1, d1vpxp2
Chain 'Q':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (10-11)
Domains in SCOPe 2.06: d1vpxq1, d1vpxq2
Chain 'R':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxr1, d1vpxr2
Chain 'S':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxs1, d1vpxs2
Chain 'T':
Compound: PROTEIN (Transaldolase (EC 2.2.1.2))
Species: Thermotoga maritima [TaxId:2336]
Gene: TM0295
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WYD1 (12-End)
  - leader sequence (11)
Domains in SCOPe 2.06: d1vpxt1, d1vpxt2
Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1vpxA (A:)
mgsdkihhhhhhmkifldtanleeikkgvewgivdgvttnptliskegaefkqrvkeicd
lvkgpvsaevvsldyegmvrearelaqiseyvvikipmtpdgikavktlsaegiktnvtl
vfspaqailaakagatyvspfvgrmddlsndgmrmlgeiveiynnygfeteiiaasirhp
mhvveaalmgvdivtmpfavleklfkhpmtdlgierfmedwkkylenlkk