PDB entry 1vpv

View 1vpv on RCSB PDB site
Description: Crystal structure of UPF0230 protein TM1468 (TM1468) from Thermotoga maritima at 2.45 A resolution
Class: structural genomics, unknown function
Keywords: TM1468, UPF0230 protein TM1468, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI
Deposited on 2004-11-18, released 2004-12-07
The last revision prior to the SCOP 1.73 freeze date was dated 2004-12-07, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.184
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: UPF0230 protein TM1468
    Species: Thermotoga maritima
    Gene: TM1468
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X1H9 (12-End)
      • modified residue (12)
      • modified residue (29)
      • modified residue (59)
      • modified residue (146)
      • modified residue (164)
      • modified residue (275)
    Domains in SCOP 1.73: d1vpva_
  • Chain 'B':
    Compound: UPF0230 protein TM1468
    Species: Thermotoga maritima
    Gene: TM1468
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X1H9 (12-End)
      • modified residue (12)
      • modified residue (29)
      • modified residue (59)
      • modified residue (146)
      • modified residue (164)
      • modified residue (275)
    Domains in SCOP 1.73: d1vpvb_
  • Heterogens: PO4, PLM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vpvA (A:)
mgsdkihhhhhhmkvkilvdstadvpfswmekydidsiplyvvwedgrsepderepeeim
nfykrireagsvpktsqpsvedfkkrylkykeedydvvlvltlssklsgtynsavlaske
vdipvyvvdtllasgaiplparvaremlengatieevlkkldermknkdfkaifyvsnfd
ylvkggrvskfqgfvgnllkirvclhiengelipyrkvrgdkkaiealieklredtpegs
klrvigvhadneagvvellntlrksyevvdeiispmgkvitthvgpgtvgfgievlerkr

    Sequence, based on observed residues (ATOM records): (download) 
    >1vpvA (A:)
mkvkilvdstadvpfswmekydidsiplyvvwedgrsepderepeeimnfykrireagsv
pktsqpsvedfkkrylkykeedydvvlvltlssklsgtynsavlaskevdipvyvvdtll
asgaiplparvaremlengatieevlkkldermknkdfkaifyvsnfdylvkggrvfvgn
llkirvclhiengelipyrkvrgdkkaiealieklredtpegsklrvigvhadneagvve
llntlrksyevvdeiispmgkvitthvgpgtvgfgievlerk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vpvB (B:)
mgsdkihhhhhhmkvkilvdstadvpfswmekydidsiplyvvwedgrsepderepeeim
nfykrireagsvpktsqpsvedfkkrylkykeedydvvlvltlssklsgtynsavlaske
vdipvyvvdtllasgaiplparvaremlengatieevlkkldermknkdfkaifyvsnfd
ylvkggrvskfqgfvgnllkirvclhiengelipyrkvrgdkkaiealieklredtpegs
klrvigvhadneagvvellntlrksyevvdeiispmgkvitthvgpgtvgfgievlerkr

    Sequence, based on observed residues (ATOM records): (download) 
    >1vpvB (B:)
mkvkilvdstadvpfswmekydidsiplyvvwedgrsepderepeeimnfykrireagsv
pktsqpsvedfkkrylkykeedydvvlvltlssklsgtynsavlaskevdipvyvvdtll
asgaiplparvaremlengatieevlkkldermknkdfkaifyvsnfdylvkggrvllki
rvclhiengelipyrkvrgdkkaiealieklredtpegsklrvigvhadneagvvellnt
lrksyevvdeiispmgkvitthvgpgtvgfgievlerk