PDB entry 1vp7
View 1vp7 on RCSB PDB site
Description: Crystal structure of Exodeoxyribonuclease VII small subunit (NP_881400.1) from Bordetella pertussis at 2.40 A resolution
Class: hydrolase
Keywords: NP_881400.1, Exodeoxyribonuclease VII small subunit E.C.3.1.11.6, structural genomics, Joint Center for Structural Genomics, JCSG, PSI, Protein Structure Initiative, HYDROLASE
Deposited on
2004-10-14, released
2004-10-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-10-04, with a file datestamp of
2017-09-29.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: exodeoxyribonuclease VII small subunit
Species: Bordetella pertussis [TaxId:257313]
Gene: NP_881400.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1vp7a_ - Chain 'B':
Compound: exodeoxyribonuclease VII small subunit
Species: Bordetella pertussis [TaxId:257313]
Gene: NP_881400.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1vp7b_ - Chain 'C':
Compound: exodeoxyribonuclease VII small subunit
Species: Bordetella pertussis [TaxId:257313]
Gene: NP_881400.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1vp7c_ - Chain 'D':
Compound: exodeoxyribonuclease VII small subunit
Species: Bordetella pertussis [TaxId:257313]
Gene: NP_881400.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1vp7d_ - Chain 'E':
Compound: exodeoxyribonuclease VII small subunit
Species: Bordetella pertussis [TaxId:257313]
Gene: NP_881400.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1vp7e_ - Chain 'F':
Compound: exodeoxyribonuclease VII small subunit
Species: Bordetella pertussis [TaxId:257313]
Gene: NP_881400.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1vp7f_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vp7A (A:)
mgsdkihhhhhhmasskqadpqtdarplpqdfetalaeleslvsamengtlpleqslsay
rrgvelarvcqdrlaqaeqqvkvlegdllrpldpaaldde
Sequence, based on observed residues (ATOM records): (download)
>1vp7A (A:)
arplpqdfetalaeleslvsamengtlpleqslsayrrgvelarvcqdrlaqaeqqvkvl
egdllrpl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1vp7B (B:)
mgsdkihhhhhhmasskqadpqtdarplpqdfetalaeleslvsamengtlpleqslsay
rrgvelarvcqdrlaqaeqqvkvlegdllrpldpaaldde
Sequence, based on observed residues (ATOM records): (download)
>1vp7B (B:)
qtdarplpqdfetalaeleslvsamengtlpleqslsayrrgvelarvcqdrlaqaeqqv
kvlegdllrpldpaald
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1vp7C (C:)
mgsdkihhhhhhmasskqadpqtdarplpqdfetalaeleslvsamengtlpleqslsay
rrgvelarvcqdrlaqaeqqvkvlegdllrpldpaaldde
Sequence, based on observed residues (ATOM records): (download)
>1vp7C (C:)
pqtdarplpqdfetalaeleslvsamengtlpleqslsayrrgvelarvcqdrlaqaeqq
vkvlegdllrp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1vp7D (D:)
mgsdkihhhhhhmasskqadpqtdarplpqdfetalaeleslvsamengtlpleqslsay
rrgvelarvcqdrlaqaeqqvkvlegdllrpldpaaldde
Sequence, based on observed residues (ATOM records): (download)
>1vp7D (D:)
arplpqdfetalaeleslvsamelpleqslsayrrgvelarvcqdrlaqaeqqvkvlegd
llrpldpaa
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1vp7E (E:)
mgsdkihhhhhhmasskqadpqtdarplpqdfetalaeleslvsamengtlpleqslsay
rrgvelarvcqdrlaqaeqqvkvlegdllrpldpaaldde
Sequence, based on observed residues (ATOM records): (download)
>1vp7E (E:)
arplpqdfetalaeleslvsamengtlpleqslsayrrgvelarvcqdrlaqaeqqvkvl
egdllrp
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1vp7F (F:)
mgsdkihhhhhhmasskqadpqtdarplpqdfetalaeleslvsamengtlpleqslsay
rrgvelarvcqdrlaqaeqqvkvlegdllrpldpaaldde
Sequence, based on observed residues (ATOM records): (download)
>1vp7F (F:)
arplpqdfetalaeleslvsamenlpleqslsayrrgvelarvcqdrlaqaeqqvkvleg
dllrp