PDB entry 1vp5
View 1vp5 on RCSB PDB site
Description: Crystal structure of 2,5-diketo-D-gluconic acid reductase (TM1009) from Thermotoga maritima at 2.40 A resolution
Class: oxidoreductase
Keywords: TM1009, 2, 5-diketo-d-gluconic acid reductase (ec 1.1.1.274), structural genomics, Joint Center for Structural Genomics, JCSG, PSI, Protein Structure Initiative, OXIDOREDUCTASE
Deposited on
2004-10-13, released
2004-10-26
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-10-11, with a file datestamp of
2017-10-06.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 2,5-diketo-d-gluconic acid reductase
Species: THERMOTOGA MARITIMA [TaxId:243274]
Gene: TM1009
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1vp5a_ - Chain 'B':
Compound: 2,5-diketo-d-gluconic acid reductase
Species: THERMOTOGA MARITIMA [TaxId:243274]
Gene: TM1009
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1vp5b_ - Heterogens: NAP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vp5A (A:)
mgsdkihhhhhhmqvpkvtlnngvempilgygvfqippekteecvyeaikvgyrlidtaa
symneegvgraikraidegivrreelfvttklwvsdvgyestkkafekslkklqleyidl
ylihqpfgdvhcawkameemykdglvraigvsnfypdrlmdlmvhheivpavnqieihpf
yqrqeeiefmrnyniqpeawgpfaegrknifqngvlrsiaekygktvaqvilrwltqkgi
vaipktvrrermkenisifdfeltqedmekiatldegqsaffshrdpevvkwicslkr
Sequence, based on observed residues (ATOM records): (download)
>1vp5A (A:)
qvpkvtlnngvempilgygvfqippekteecvyeaikvgyrlidtaasymneegvgraik
raidegivrreelfvttklwvsdvgyestkkafekslkklqleyidlylihqpfgdvhca
wkameemykdglvraigvsnfypdrlmdlmvhheivpavnqieihpfyqrqeeiefmrny
niqpeawgpfaegrknifqngvlrsiaekygktvaqvilrwltqkgivaipktvrrermk
enisifdfeltqedmekiatldegqsaffshrdpevvkwicslk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1vp5B (B:)
mgsdkihhhhhhmqvpkvtlnngvempilgygvfqippekteecvyeaikvgyrlidtaa
symneegvgraikraidegivrreelfvttklwvsdvgyestkkafekslkklqleyidl
ylihqpfgdvhcawkameemykdglvraigvsnfypdrlmdlmvhheivpavnqieihpf
yqrqeeiefmrnyniqpeawgpfaegrknifqngvlrsiaekygktvaqvilrwltqkgi
vaipktvrrermkenisifdfeltqedmekiatldegqsaffshrdpevvkwicslkr
Sequence, based on observed residues (ATOM records): (download)
>1vp5B (B:)
qvpkvtlnngvempilgygvfqippekteecvyeaikvgyrlidtaasymneegvgraik
raidegivrreelfvttklwvsdvgyestkkafekslkklqleyidlylihqpfgdvhca
wkameemykdglvraigvsnfypdrlmdlmvhheivpavnqieihpfyqrqeeiefmrny
niqpeawgpfaegrknifqngvlrsiaekygktvaqvilrwltqkgivaipktvrrermk
enisifdfeltqedmekiatldegqsaffshrdpevvkwicsl