PDB entry 1vm8

View 1vm8 on RCSB PDB site
Description: Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution
Class: transferase
Keywords: Agx2, 16741099, UDP-N-acetylglucosamine pyrophosphorylase, STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, Joint Center for Structural Genomics
Deposited on 2004-09-10, released 2004-10-05
The last revision prior to the SCOP 1.73 freeze date was dated 2006-03-28, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.21
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: UDP-N-acteylglucosamine pyrophosphorylase
    Species: MUS MUSCULUS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91YN5
      • see remark 999 (42)
      • modified residue (46)
      • modified residue (51)
      • modified residue (80)
      • modified residue (135)
      • modified residue (176)
      • modified residue (182)
      • modified residue (209)
      • modified residue (213)
      • modified residue (229)
      • modified residue (250)
      • modified residue (389)
      • modified residue (437)
    Domains in SCOP 1.73: d1vm8a_
  • Chain 'B':
    Compound: UDP-N-acteylglucosamine pyrophosphorylase
    Species: MUS MUSCULUS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91YN5
      • see remark 999 (42)
      • modified residue (46)
      • modified residue (51)
      • modified residue (80)
      • modified residue (135)
      • modified residue (176)
      • modified residue (182)
      • modified residue (209)
      • modified residue (213)
      • modified residue (229)
      • modified residue (250)
      • modified residue (389)
      • modified residue (437)
    Domains in SCOP 1.73: d1vm8b_
  • Heterogens: CL, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vm8A (A:)
mgsdkihhhhhhmnvndlkqrlsqagqehllqfwnelseaqqmelymelqamnfeelnsf
frkaigefdrsshqekvdarmepvprqvlgsatrdqeqlqaweseglsqisqnkvavlll
aggqgtrlgvsypkgmydvglpshktlfqiqaerilklqqlaekhhgnkctipwyimtsg
rtmestkefftkhkffglkkenvvffqqgmlpamsfdgkiileeknkvsmapdgngglyr
alaaqnivedmeqrgicsihvycvdnilvkvadprfigfciqkgadcgakvvektnptep
vgvvcrvdgvyqvveyseislataqrrssdgrllfnagnianhfftvpflkdvvnvyepq
lqhhvaqkkipyvdsqgyfikpdkpngikmekfvfdifqfakkfvvyevlredefsplkn
adsqngkdnpttarhalmslhhcwvlnagghfidengsrlpaiprsatngkseaitadvn
hnlkdandvpiqceisplisyageglegyvadkefhapliidengvhelvkngi

    Sequence, based on observed residues (ATOM records): (download) 
    >1vm8A (A:)
nvndlkqrlsqagqehllqfwnelseaqqmelymelqamnfeelnsffrkaigefdrssh
qekvdarmepvprqvlgsatrdqeqlqaweseglsqisqnkvavlllaggqgtrlgvsyp
kgmydvglpshktlfqiqaerilklqqlaekhhgnkctipwyimtsgrtmestkefftkh
kffglkkenvvffqqgmlpamsfdgkiileeknkvsmapdgngglyralaaqnivedmeq
rgicsihvycvdnilvkvadprfigfciqkgadcgakvvektnptepvgvvcrvdgvyqv
veyseislataqrrssdgrllfnagnianhfftvpflkdvvnvyepqlqhhvaqkkipyv
dsqgyfikpdkpngikmekfvfdifqfakkfvvyevlredefsplknadsqgkdnpttar
halmslhhcwvlnagghfidengsrlpaipvpiqceisplisyageglegyvadkefhap
liidengvhel

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vm8B (B:)
mgsdkihhhhhhmnvndlkqrlsqagqehllqfwnelseaqqmelymelqamnfeelnsf
frkaigefdrsshqekvdarmepvprqvlgsatrdqeqlqaweseglsqisqnkvavlll
aggqgtrlgvsypkgmydvglpshktlfqiqaerilklqqlaekhhgnkctipwyimtsg
rtmestkefftkhkffglkkenvvffqqgmlpamsfdgkiileeknkvsmapdgngglyr
alaaqnivedmeqrgicsihvycvdnilvkvadprfigfciqkgadcgakvvektnptep
vgvvcrvdgvyqvveyseislataqrrssdgrllfnagnianhfftvpflkdvvnvyepq
lqhhvaqkkipyvdsqgyfikpdkpngikmekfvfdifqfakkfvvyevlredefsplkn
adsqngkdnpttarhalmslhhcwvlnagghfidengsrlpaiprsatngkseaitadvn
hnlkdandvpiqceisplisyageglegyvadkefhapliidengvhelvkngi

    Sequence, based on observed residues (ATOM records): (download) 
    >1vm8B (B:)
nvndlkqrlsqagqehllqfwnelseaqqmelymelqamnfeelnsffrkaigefdrssh
qekvdarmepvprqvlgsatrdqeqlqaweseglsqisqnkvavlllaggqgtrlgvsyp
kgmydvglpshktlfqiqaerilklqqlaekhhgnkctipwyimtsgrtmestkefftkh
kffglkkenvvffqqgmlpamsfdgkiileeknkvsmapdgngglyralaaqnivedmeq
rgicsihvycvdnilvkvadprfigfciqkgadcgakvvektnptepvgvvcrvdgvyqv
veyseislataqrrssdgrllfnagnianhfftvpflkdvvnvyepqlqhhvaqkkipyv
dsqgyfikpdkpngikmekfvfdifqfakkfvvyevlredefsplknadsgkdnpttarh
almslhhcwvlnagghfidengsrlpaiprvpiqceisplisyageglegyvadkefhap
liidengvhe