PDB entry 1vle

View 1vle on RCSB PDB site
Description: Crystal Structure of Pyrogallol-Phloroglucinol Transhydroxylase from Pelobacter acidigallici complexed with pyrogallol
Class: oxidoreductase
Keywords: Molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster, complex with substrate pyrogallol, OXIDOREDUCTASE
Deposited on 2004-07-22, released 2004-08-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.178
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'M':
    Compound: Pyrogallol hydroxytransferase large subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80563 (1-874)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d1vlem1, d1vlem2
  • Chain 'N':
    Compound: Pyrogallol hydroxytransferase small subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vlen1, d1vlen2
  • Chain 'O':
    Compound: Pyrogallol hydroxytransferase large subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80563 (1-874)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d1vleo1, d1vleo2
  • Chain 'P':
    Compound: Pyrogallol hydroxytransferase small subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vlep1, d1vlep2
  • Chain 'Q':
    Compound: Pyrogallol hydroxytransferase large subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80563 (1-874)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d1vleq1, d1vleq2
  • Chain 'R':
    Compound: Pyrogallol hydroxytransferase small subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vler1, d1vler2
  • Chain 'S':
    Compound: Pyrogallol hydroxytransferase large subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80563 (1-874)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d1vles1, d1vles2
  • Chain 'T':
    Compound: Pyrogallol hydroxytransferase small subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vlet1, d1vlet2
  • Chain 'U':
    Compound: Pyrogallol hydroxytransferase large subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80563 (1-874)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d1vleu1, d1vleu2
  • Chain 'V':
    Compound: Pyrogallol hydroxytransferase small subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vlev1, d1vlev2
  • Chain 'W':
    Compound: Pyrogallol hydroxytransferase large subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80563 (1-874)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d1vlew1, d1vlew2
  • Chain 'X':
    Compound: Pyrogallol hydroxytransferase small subunit
    Species: Pelobacter acidigallici [TaxId:35816]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vlex1, d1vlex2
  • Heterogens: CA, MGD, 4MO, SF4, PYG, HOH

PDB Chain Sequences:

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleM (M:)
mgevvrltnsstggpvfvyvkdgkiirmtpmdfddavdapswkieargktftpprktsia
pytagfksmiysdlripypmkrksfdpngernpqlrgaglskqdpwsdyeriswdeatdi
vvaeinrikhaygpsailstpsshhmwgnvgyrhstyfrfmnmmgftyadhnpdswegwh
wggmhmwgfswrlgnpeqydlledglkhaemivfwssdpetnsgiyagfesnirrqwlkd
lgvdfvfidphmnhtarlvadkwfspkigtdhalsfaiaytwlkedsydkeyvaanahgf
eewadyvlgktdgtpktcewaeeesgvpaceiralarqwakkntylaagglggwggacra
shgiewargmialatmqgmgkpgsnmwsttqgvpldyefyfpgyaeggisgdcensaagf
kfawrmfdgkttfpspsnlntsagqhiprlkipecimggkfqwsgkgfaggdishqlhqy
eypapgyskikmfwkyggphlgtmtatnryakmythdslefvvsqsiwfegevpfadiil
pactnferwdisefancsgyipdnyqlcnhrvislqakciepvgesmsdyeiyrlfakkl
nieemfsegkdelawceqyfnatdmpkymtwdeffkkgyfvvpdnpnrkktvalrwfaeg
rekdtpdwgprlnnqvcrkglqtttgkvefiatslknfeeqgyidehrpsmhtyvpawes
qkhsplavkyplgmlsphprfsmhtmgdgknsymnyikdhrvevdgykywimrvnsidae
argikngdlirayndrgsvilaaqvteclqpgtvhsyescavydplgtagksadrggcin
iltpdryiskyacgmanntalveiekwdgdkyeiy

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleN (N:)
meqyymvidvakcqdcnncfmgcmdehelnewpgytasmqrghrwmnierrergtyprnd
inyrptpcmhcenapcvakgngavyqredgivlidpekakgkkelldtcpygvmywneee
nvaqkctmcahllddeswapkmprcahncgsfvyeflkttpeamakkveeeglevikpel
gtkprvyyknlyrfeknyvtagilvqgdcfegakvvlksggkevasaetnffgefkfdal
dngeytveidadgksysdtvviddksvdlgfikl

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleO (O:)
mgevvrltnsstggpvfvyvkdgkiirmtpmdfddavdapswkieargktftpprktsia
pytagfksmiysdlripypmkrksfdpngernpqlrgaglskqdpwsdyeriswdeatdi
vvaeinrikhaygpsailstpsshhmwgnvgyrhstyfrfmnmmgftyadhnpdswegwh
wggmhmwgfswrlgnpeqydlledglkhaemivfwssdpetnsgiyagfesnirrqwlkd
lgvdfvfidphmnhtarlvadkwfspkigtdhalsfaiaytwlkedsydkeyvaanahgf
eewadyvlgktdgtpktcewaeeesgvpaceiralarqwakkntylaagglggwggacra
shgiewargmialatmqgmgkpgsnmwsttqgvpldyefyfpgyaeggisgdcensaagf
kfawrmfdgkttfpspsnlntsagqhiprlkipecimggkfqwsgkgfaggdishqlhqy
eypapgyskikmfwkyggphlgtmtatnryakmythdslefvvsqsiwfegevpfadiil
pactnferwdisefancsgyipdnyqlcnhrvislqakciepvgesmsdyeiyrlfakkl
nieemfsegkdelawceqyfnatdmpkymtwdeffkkgyfvvpdnpnrkktvalrwfaeg
rekdtpdwgprlnnqvcrkglqtttgkvefiatslknfeeqgyidehrpsmhtyvpawes
qkhsplavkyplgmlsphprfsmhtmgdgknsymnyikdhrvevdgykywimrvnsidae
argikngdlirayndrgsvilaaqvteclqpgtvhsyescavydplgtagksadrggcin
iltpdryiskyacgmanntalveiekwdgdkyeiy

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleP (P:)
meqyymvidvakcqdcnncfmgcmdehelnewpgytasmqrghrwmnierrergtyprnd
inyrptpcmhcenapcvakgngavyqredgivlidpekakgkkelldtcpygvmywneee
nvaqkctmcahllddeswapkmprcahncgsfvyeflkttpeamakkveeeglevikpel
gtkprvyyknlyrfeknyvtagilvqgdcfegakvvlksggkevasaetnffgefkfdal
dngeytveidadgksysdtvviddksvdlgfikl

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleQ (Q:)
mgevvrltnsstggpvfvyvkdgkiirmtpmdfddavdapswkieargktftpprktsia
pytagfksmiysdlripypmkrksfdpngernpqlrgaglskqdpwsdyeriswdeatdi
vvaeinrikhaygpsailstpsshhmwgnvgyrhstyfrfmnmmgftyadhnpdswegwh
wggmhmwgfswrlgnpeqydlledglkhaemivfwssdpetnsgiyagfesnirrqwlkd
lgvdfvfidphmnhtarlvadkwfspkigtdhalsfaiaytwlkedsydkeyvaanahgf
eewadyvlgktdgtpktcewaeeesgvpaceiralarqwakkntylaagglggwggacra
shgiewargmialatmqgmgkpgsnmwsttqgvpldyefyfpgyaeggisgdcensaagf
kfawrmfdgkttfpspsnlntsagqhiprlkipecimggkfqwsgkgfaggdishqlhqy
eypapgyskikmfwkyggphlgtmtatnryakmythdslefvvsqsiwfegevpfadiil
pactnferwdisefancsgyipdnyqlcnhrvislqakciepvgesmsdyeiyrlfakkl
nieemfsegkdelawceqyfnatdmpkymtwdeffkkgyfvvpdnpnrkktvalrwfaeg
rekdtpdwgprlnnqvcrkglqtttgkvefiatslknfeeqgyidehrpsmhtyvpawes
qkhsplavkyplgmlsphprfsmhtmgdgknsymnyikdhrvevdgykywimrvnsidae
argikngdlirayndrgsvilaaqvteclqpgtvhsyescavydplgtagksadrggcin
iltpdryiskyacgmanntalveiekwdgdkyeiy

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleR (R:)
meqyymvidvakcqdcnncfmgcmdehelnewpgytasmqrghrwmnierrergtyprnd
inyrptpcmhcenapcvakgngavyqredgivlidpekakgkkelldtcpygvmywneee
nvaqkctmcahllddeswapkmprcahncgsfvyeflkttpeamakkveeeglevikpel
gtkprvyyknlyrfeknyvtagilvqgdcfegakvvlksggkevasaetnffgefkfdal
dngeytveidadgksysdtvviddksvdlgfikl

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleS (S:)
mgevvrltnsstggpvfvyvkdgkiirmtpmdfddavdapswkieargktftpprktsia
pytagfksmiysdlripypmkrksfdpngernpqlrgaglskqdpwsdyeriswdeatdi
vvaeinrikhaygpsailstpsshhmwgnvgyrhstyfrfmnmmgftyadhnpdswegwh
wggmhmwgfswrlgnpeqydlledglkhaemivfwssdpetnsgiyagfesnirrqwlkd
lgvdfvfidphmnhtarlvadkwfspkigtdhalsfaiaytwlkedsydkeyvaanahgf
eewadyvlgktdgtpktcewaeeesgvpaceiralarqwakkntylaagglggwggacra
shgiewargmialatmqgmgkpgsnmwsttqgvpldyefyfpgyaeggisgdcensaagf
kfawrmfdgkttfpspsnlntsagqhiprlkipecimggkfqwsgkgfaggdishqlhqy
eypapgyskikmfwkyggphlgtmtatnryakmythdslefvvsqsiwfegevpfadiil
pactnferwdisefancsgyipdnyqlcnhrvislqakciepvgesmsdyeiyrlfakkl
nieemfsegkdelawceqyfnatdmpkymtwdeffkkgyfvvpdnpnrkktvalrwfaeg
rekdtpdwgprlnnqvcrkglqtttgkvefiatslknfeeqgyidehrpsmhtyvpawes
qkhsplavkyplgmlsphprfsmhtmgdgknsymnyikdhrvevdgykywimrvnsidae
argikngdlirayndrgsvilaaqvteclqpgtvhsyescavydplgtagksadrggcin
iltpdryiskyacgmanntalveiekwdgdkyeiy

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleT (T:)
meqyymvidvakcqdcnncfmgcmdehelnewpgytasmqrghrwmnierrergtyprnd
inyrptpcmhcenapcvakgngavyqredgivlidpekakgkkelldtcpygvmywneee
nvaqkctmcahllddeswapkmprcahncgsfvyeflkttpeamakkveeeglevikpel
gtkprvyyknlyrfeknyvtagilvqgdcfegakvvlksggkevasaetnffgefkfdal
dngeytveidadgksysdtvviddksvdlgfikl

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleU (U:)
mgevvrltnsstggpvfvyvkdgkiirmtpmdfddavdapswkieargktftpprktsia
pytagfksmiysdlripypmkrksfdpngernpqlrgaglskqdpwsdyeriswdeatdi
vvaeinrikhaygpsailstpsshhmwgnvgyrhstyfrfmnmmgftyadhnpdswegwh
wggmhmwgfswrlgnpeqydlledglkhaemivfwssdpetnsgiyagfesnirrqwlkd
lgvdfvfidphmnhtarlvadkwfspkigtdhalsfaiaytwlkedsydkeyvaanahgf
eewadyvlgktdgtpktcewaeeesgvpaceiralarqwakkntylaagglggwggacra
shgiewargmialatmqgmgkpgsnmwsttqgvpldyefyfpgyaeggisgdcensaagf
kfawrmfdgkttfpspsnlntsagqhiprlkipecimggkfqwsgkgfaggdishqlhqy
eypapgyskikmfwkyggphlgtmtatnryakmythdslefvvsqsiwfegevpfadiil
pactnferwdisefancsgyipdnyqlcnhrvislqakciepvgesmsdyeiyrlfakkl
nieemfsegkdelawceqyfnatdmpkymtwdeffkkgyfvvpdnpnrkktvalrwfaeg
rekdtpdwgprlnnqvcrkglqtttgkvefiatslknfeeqgyidehrpsmhtyvpawes
qkhsplavkyplgmlsphprfsmhtmgdgknsymnyikdhrvevdgykywimrvnsidae
argikngdlirayndrgsvilaaqvteclqpgtvhsyescavydplgtagksadrggcin
iltpdryiskyacgmanntalveiekwdgdkyeiy

  • Chain 'V':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleV (V:)
meqyymvidvakcqdcnncfmgcmdehelnewpgytasmqrghrwmnierrergtyprnd
inyrptpcmhcenapcvakgngavyqredgivlidpekakgkkelldtcpygvmywneee
nvaqkctmcahllddeswapkmprcahncgsfvyeflkttpeamakkveeeglevikpel
gtkprvyyknlyrfeknyvtagilvqgdcfegakvvlksggkevasaetnffgefkfdal
dngeytveidadgksysdtvviddksvdlgfikl

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleW (W:)
mgevvrltnsstggpvfvyvkdgkiirmtpmdfddavdapswkieargktftpprktsia
pytagfksmiysdlripypmkrksfdpngernpqlrgaglskqdpwsdyeriswdeatdi
vvaeinrikhaygpsailstpsshhmwgnvgyrhstyfrfmnmmgftyadhnpdswegwh
wggmhmwgfswrlgnpeqydlledglkhaemivfwssdpetnsgiyagfesnirrqwlkd
lgvdfvfidphmnhtarlvadkwfspkigtdhalsfaiaytwlkedsydkeyvaanahgf
eewadyvlgktdgtpktcewaeeesgvpaceiralarqwakkntylaagglggwggacra
shgiewargmialatmqgmgkpgsnmwsttqgvpldyefyfpgyaeggisgdcensaagf
kfawrmfdgkttfpspsnlntsagqhiprlkipecimggkfqwsgkgfaggdishqlhqy
eypapgyskikmfwkyggphlgtmtatnryakmythdslefvvsqsiwfegevpfadiil
pactnferwdisefancsgyipdnyqlcnhrvislqakciepvgesmsdyeiyrlfakkl
nieemfsegkdelawceqyfnatdmpkymtwdeffkkgyfvvpdnpnrkktvalrwfaeg
rekdtpdwgprlnnqvcrkglqtttgkvefiatslknfeeqgyidehrpsmhtyvpawes
qkhsplavkyplgmlsphprfsmhtmgdgknsymnyikdhrvevdgykywimrvnsidae
argikngdlirayndrgsvilaaqvteclqpgtvhsyescavydplgtagksadrggcin
iltpdryiskyacgmanntalveiekwdgdkyeiy

  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vleX (X:)
meqyymvidvakcqdcnncfmgcmdehelnewpgytasmqrghrwmnierrergtyprnd
inyrptpcmhcenapcvakgngavyqredgivlidpekakgkkelldtcpygvmywneee
nvaqkctmcahllddeswapkmprcahncgsfvyeflkttpeamakkveeeglevikpel
gtkprvyyknlyrfeknyvtagilvqgdcfegakvvlksggkevasaetnffgefkfdal
dngeytveidadgksysdtvviddksvdlgfikl