PDB entry 1vl0

View 1vl0 on RCSB PDB site
Description: crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution
Class: oxidoreductase
Keywords: dtdp-4-dehydrorhamnose reductase, rfbd ortholog, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi, oxidoreductase
Deposited on 2004-06-30, released 2004-08-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DTDP-4-dehydrorhamnose reductase, rfbD ortholog
    Species: Clostridium acetobutylicum [TaxId:272562]
    Gene: CAC2315
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q97GQ1 (12-291)
      • leader sequence (11)
      • modified residue (12)
      • modified residue (173)
      • modified residue (266)
      • modified residue (291)
    Domains in SCOPe 2.07: d1vl0a1, d1vl0a2
  • Chain 'B':
    Compound: DTDP-4-dehydrorhamnose reductase, rfbD ortholog
    Species: Clostridium acetobutylicum [TaxId:272562]
    Gene: CAC2315
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q97GQ1 (12-291)
      • modified residue (12)
      • modified residue (173)
      • modified residue (266)
      • modified residue (291)
    Domains in SCOPe 2.07: d1vl0b_
  • Chain 'C':
    Compound: DTDP-4-dehydrorhamnose reductase, rfbD ortholog
    Species: Clostridium acetobutylicum [TaxId:272562]
    Gene: CAC2315
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q97GQ1 (12-291)
      • leader sequence (11)
      • modified residue (12)
      • modified residue (173)
      • modified residue (266)
      • modified residue (291)
    Domains in SCOPe 2.07: d1vl0c1, d1vl0c2
  • Heterogens: NAI, UNL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vl0A (A:)
mgsdkihhhhhhmkilitgangqlgreiqkqlkgknveviptdvqdlditnvlavnkffn
ekkpnvvincaahtavdkceeqydlaykinaigpknlaaaaysvgaeivqistdyvfdge
akepitefdevnpqsaygktklegenfvkalnpkyyivrtawlygdgnnfvktminlgkt
hdelkvvhdqvgtptstvdlarvvlkvideknygtfhctckgicswydfaveifrltgid
vkvtpctteefprpakrpkysvlrnymlelttgditrewkeslkeyidllqm

    Sequence, based on observed residues (ATOM records): (download) 
    >1vl0A (A:)
hmkilitgangqlgreiqkqlkgknveviptdvqdlditnvlavnkffnekkpnvvinca
ahtavdkceeqydlaykinaigpknlaaaaysvgaeivqistdyvfdgeakepitefdev
npqsaygktklegenfvkalnpkyyivrtawlygdgnnfvktminlgkthdelkvvhdqv
gtptstvdlarvvlkvideknygtfhctckgicswydfaveifrltgidvkvtpctteef
prpakrpkysvlrnymlelttgditrewkeslkeyidllqm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vl0B (B:)
mgsdkihhhhhhmkilitgangqlgreiqkqlkgknveviptdvqdlditnvlavnkffn
ekkpnvvincaahtavdkceeqydlaykinaigpknlaaaaysvgaeivqistdyvfdge
akepitefdevnpqsaygktklegenfvkalnpkyyivrtawlygdgnnfvktminlgkt
hdelkvvhdqvgtptstvdlarvvlkvideknygtfhctckgicswydfaveifrltgid
vkvtpctteefprpakrpkysvlrnymlelttgditrewkeslkeyidllqm

    Sequence, based on observed residues (ATOM records): (download) 
    >1vl0B (B:)
mkilitgangqlgreiqkqlkgknveviptdvqdlditnvlavnkffnekkpnvvincaa
htavdkceeqydlaykinaigpknlaaaaysvgaeivqistdyvfdgeakepitefdevn
pqsaygktklegenfvkalnpkyyivrtawlygdgnnfvktminlgkthdelkvvhdqvg
tptstvdlarvvlkvideknygtfhctckgicswydfaveifrltgidvkvtpctteefp
rpakrpkysvlrnymlelttgditrewkeslkeyidllqm

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1vl0C (C:)
mgsdkihhhhhhmkilitgangqlgreiqkqlkgknveviptdvqdlditnvlavnkffn
ekkpnvvincaahtavdkceeqydlaykinaigpknlaaaaysvgaeivqistdyvfdge
akepitefdevnpqsaygktklegenfvkalnpkyyivrtawlygdgnnfvktminlgkt
hdelkvvhdqvgtptstvdlarvvlkvideknygtfhctckgicswydfaveifrltgid
vkvtpctteefprpakrpkysvlrnymlelttgditrewkeslkeyidllqm

    Sequence, based on observed residues (ATOM records): (download) 
    >1vl0C (C:)
hmkilitgangqlgreiqkqlkgknveviptdvqdlditnvlavnkffnekkpnvvinca
ahtavdkceeqydlaykinaigpknlaaaaysvgaeivqistdyvfdgeakepitefdev
npqsaygktklegenfvkalnpkyyivrtawlygdgnnfvktminlgkthdelkvvhdqv
gtptstvdlarvvlkvideknygtfhctckgicswydfaveifrltgidvkvtpctteef
prpakrpkysvlrnymlelttgditrewkeslkeyidllqm