PDB entry 1vk2

View 1vk2 on RCSB PDB site
Description: Crystal structure of Uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution
Class: hydrolase
Keywords: TM0511, URACIL-DNA GLYCOSYLASE, STRUCTURAL GENOMICS, JCSG, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, HYDROLASE
Deposited on 2004-04-16, released 2004-05-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.179
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uracil-DNA glycosylase TM0511
    Species: Thermotoga maritima [TaxId:2336]
    Gene: TM0511
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WYY1 (12-End)
      • modified residue (12)
      • modified residue (19)
      • modified residue (76)
    Domains in SCOPe 2.08: d1vk2a_
  • Heterogens: SF4, UNL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vk2A (A:)
mgsdkihhhhhhmytreelmeivservkkctacplhlnrtnvvvgegnldtrivfvgegp
geeedktgrpfvgragmlltellresgirredvyicnvvkcrppnnrtptpeeqaacghf
llaqieiinpdvivalgatalsffvdgkkvsitkvrgnpidwlggkkviptfhpsyllrn
rsnelrrivlediekaksfikkeg

    Sequence, based on observed residues (ATOM records): (download) 
    >1vk2A (A:)
mytreelmeivservkkctacplhlnrtnvvvgegnldtrivfvgegpgeeedktgrpfv
gragmlltellresgirredvyicnvvkcrppnnrtptpeeqaacghfllaqieiinpdv
ivalgatalsffvdgkkvsitkvrgnpidwlggkkviptfhpsyllrnrsnelrrivled
iekaksfikke