PDB entry 1vim

View 1vim on RCSB PDB site
Description: Crystal structure of an hypothetical protein
Class: Structural genomics, unknown function
Keywords: structural genomics, unknown function
Deposited on 2003-12-01, released 2003-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-04, with a file datestamp of 2017-09-29.
Experiment type: XRAY
Resolution: 1.36 Å
R-factor: N/A
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical protein AF1796
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: AF1796
    Database cross-references and differences (RAF-indexed):
    • Uniprot O28478 (14-195)
      • cloning artifact (7-13)
      • variant (94)
      • cloning artifact (196-198)
    Domains in SCOPe 2.08: d1vima1, d1vima2, d1vima3
  • Chain 'B':
    Compound: Hypothetical protein AF1796
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: AF1796
    Database cross-references and differences (RAF-indexed):
    • Uniprot O28478 (14-195)
      • cloning artifact (10-13)
      • variant (94)
      • cloning artifact (196-197)
    Domains in SCOPe 2.08: d1vimb1, d1vimb2, d1vimb3
  • Chain 'C':
    Compound: Hypothetical protein AF1796
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: AF1796
    Database cross-references and differences (RAF-indexed):
    • Uniprot O28478 (14-195)
      • cloning artifact (8-13)
      • variant (94)
      • cloning artifact (196-197)
    Domains in SCOPe 2.08: d1vimc1, d1vimc2, d1vimc3
  • Chain 'D':
    Compound: Hypothetical protein AF1796
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: AF1796
    Database cross-references and differences (RAF-indexed):
    • Uniprot O28478 (14-195)
      • cloning artifact (8-13)
      • variant (94)
      • cloning artifact (196-197)
    Domains in SCOPe 2.08: d1vimd1, d1vimd2, d1vimd3
  • Heterogens: FMT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vimA (A:)
mghhhhhhgghmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgy
iakafamrlmhlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklv
avtgkrdsslakmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmq
khltekdlearhavleeggs

    Sequence, based on observed residues (ATOM records): (download) 
    >1vimA (A:)
hgghmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgyiakafam
rlmhlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklvavtgkrd
sslakmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmqkhltekd
learhavleegg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vimB (B:)
mghhhhhhgghmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgy
iakafamrlmhlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklv
avtgkrdsslakmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmq
khltekdlearhavleeggs

    Sequence, based on observed residues (ATOM records): (download) 
    >1vimB (B:)
hmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgyiakafamrlm
hlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklvavtgkrdssl
akmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmqkhltekdlea
rhavleeg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1vimC (C:)
mghhhhhhgghmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgy
iakafamrlmhlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklv
avtgkrdsslakmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmq
khltekdlearhavleeggs

    Sequence, based on observed residues (ATOM records): (download) 
    >1vimC (C:)
gghmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgyiakafamr
lmhlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklvavtgkrds
slakmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmqkhltekdl
earhavleeg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1vimD (D:)
mghhhhhhgghmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgy
iakafamrlmhlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklv
avtgkrdsslakmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmq
khltekdlearhavleeggs

    Sequence, based on observed residues (ATOM records): (download) 
    >1vimD (D:)
gghmsllrflevvsehiknlrnhidletvgemiklidsarsifvigagrsgyiakafamr
lmhlgytvyvvgetvtpritdqdvlvgisgsgettsvvniskkakdigsklvavtgkrds
slakmadvvmvvkgkmkqerdeilsqlaplgtmfeltamifldalvaeimmqkhltekdl
earhavleeg