PDB entry 1vic

View 1vic on RCSB PDB site
Description: Crystal structure of CMP-KDO synthetase
Class: transferase
Keywords: structural genomics, Transferase
Deposited on 2003-12-01, released 2003-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-04, with a file datestamp of 2017-09-29.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Haemophilus influenzae [TaxId:727]
    Gene: KDSB, HI0058
    Database cross-references and differences (RAF-indexed):
    • Uniprot P44490 (1-253)
      • cloning artifact (254-255)
    Domains in SCOPe 2.08: d1vica1, d1vica2
  • Chain 'B':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Haemophilus influenzae [TaxId:727]
    Gene: KDSB, HI0058
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vicb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vicA (A:)
msftviiparfassrlpgkpladikgkpmiqhvfekalqsgasrviiatdnenvadvaks
fgaevcmtsvnhnsgterlaevveklaipdneiivniqgdeplippvivrqvadnlakfn
vnmaslavkihdaeelfnpnavkvltdkdgyvlyfsrsvipydrdqfmnlqdvqkvqlsd
aylrhigiyayragfikqyvqwaptqlenlekleqlrvlyngerihvelakevpavgvdt
aedlekvrailaangshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vicA (A:)
sftviiparfassrlpgkpladikgkpmiqhvfekalqsgasrviiatdnenvadvaksf
gaevcmtsvnhnsgterlaevveklaipdneiivniqgdeplippvivrqvadnlakfnv
nmaslavkihdaeelfnpnavkvltdkdgyvlyfsrsvipydrdqfmnlqdvqkvqlsda
ylrhigiyayragfikqyvqwaptqlenlekleqlrvlyngerihvelakevpavgvdta
edlekvrailaangs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vicB (B:)
msftviiparfassrlpgkpladikgkpmiqhvfekalqsgasrviiatdnenvadvaks
fgaevcmtsvnhnsgterlaevveklaipdneiivniqgdeplippvivrqvadnlakfn
vnmaslavkihdaeelfnpnavkvltdkdgyvlyfsrsvipydrdqfmnlqdvqkvqlsd
aylrhigiyayragfikqyvqwaptqlenlekleqlrvlyngerihvelakevpavgvdt
aedlekvrailaangshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vicB (B:)
sftviiparfassrlpgkpladikgkpmiqhvfekalqsgasrviiatdnenvadvaksf
gaevcmtsvnhnsgterlaevveklaipdneiivniqgdeplippvivrqvadnlakfnv
nmaslavkihdaeelfnpnavkvltdkdgyvlyfsrsvipydrdqfmnkvqlsdaylrhi
giyayragfikqyvqwaptqlenlekleqlrvlyngerihvelakevpavgvdtaedlek
vrailaan