PDB entry 1vhj

View 1vhj on RCSB PDB site
Description: Crystal structure of purine nucleoside phosphorylase
Class: Transferase
Keywords: structural genomics
Deposited on 2003-12-01, released 2003-12-30
The last revision prior to the SCOP 1.73 freeze date was dated 2005-08-30, with a file datestamp of 2007-07-20.
Experiment type: XRAY
Resolution: 2.23 Å
R-factor: 0.196
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: purine nucleoside phosphorylase
    Species: Vibrio cholerae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KPM0 (3-End)
      • variant (58)
    Domains in SCOP 1.73: d1vhja_
  • Chain 'B':
    Compound: purine nucleoside phosphorylase
    Species: Vibrio cholerae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KPM0 (3-End)
      • variant (58)
    Domains in SCOP 1.73: d1vhjb_
  • Chain 'C':
    Compound: purine nucleoside phosphorylase
    Species: Vibrio cholerae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KPM0 (3-End)
      • variant (58)
    Domains in SCOP 1.73: d1vhjc_
  • Chain 'D':
    Compound: purine nucleoside phosphorylase
    Species: Vibrio cholerae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KPM0 (3-End)
      • variant (58)
    Domains in SCOP 1.73: d1vhjd_
  • Chain 'E':
    Compound: purine nucleoside phosphorylase
    Species: Vibrio cholerae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KPM0 (3-End)
      • variant (58)
    Domains in SCOP 1.73: d1vhje_
  • Chain 'F':
    Compound: purine nucleoside phosphorylase
    Species: Vibrio cholerae
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KPM0 (3-End)
      • variant (58)
    Domains in SCOP 1.73: d1vhjf_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vhjA (A:)
mslatphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrri
svmghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnr
irfkdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivg
vemeaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq
agyeggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vhjA (A:)
atphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrrisvm
ghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnrirf
kdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivgvem
eaagiygvaaeygakalaictvsdhiktgeseerqntfnemieialdsvligdq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vhjB (B:)
mslatphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrri
svmghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnr
irfkdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivg
vemeaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq
agyeggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vhjB (B:)
atphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrrisvm
ghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnrirf
kdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivgvem
eaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1vhjC (C:)
mslatphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrri
svmghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnr
irfkdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivg
vemeaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq
agyeggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vhjC (C:)
atphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrrisvm
ghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnrirf
kdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivgvem
eaagiygvaaeygakalaictvsdhiktgeerqntfnemieialdsvligdq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1vhjD (D:)
mslatphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrri
svmghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnr
irfkdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivg
vemeaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq
agyeggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vhjD (D:)
atphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrrisvm
ghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnrirf
kdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivgvem
eaagiygvaaeygakalaictvsdhiktgeerqntfnemieialdsvligdq

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1vhjE (E:)
mslatphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrri
svmghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnr
irfkdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivg
vemeaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq
agyeggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vhjE (E:)
atphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrrisvm
ghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnrirf
kdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivgvem
eaagiygvaaeygakalaictvsdhiktgeerqntfnemieialdsvligdq

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1vhjF (F:)
mslatphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrri
svmghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnr
irfkdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivg
vemeaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq
agyeggshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vhjF (F:)
atphinaqmgdfadvvlmpgdplrakyiaenfldnavqvcdvrnmfgytgtykgrrisvm
ghgmgipscsiyvtelikdygvkkiirvgscgavnegikvrdvvigmgactdskvnrirf
kdhdfaaiadykmvkaaeeaakargidvkvgnlfsaelfytpdpsmfdvmdkygivgvem
eaagiygvaaeygakalaictvsdhiktgeqttseerqntfnemieialdsvligdq