PDB entry 1vgj

View 1vgj on RCSB PDB site
Description: Crystal structure of 2'-5' RNA ligase from Pyrococcus horikoshii
Class: ligase
Keywords: Alpha+Beta, LigT-like, STRUCTURAL GENOMICS, LIGASE
Deposited on 2004-04-27, released 2005-06-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: 0.216
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical protein PH0099
    Species: Pyrococcus horikoshii [TaxId:53953]
    Gene: PH0099
    Database cross-references and differences (RAF-indexed):
    • Uniprot O57823 (0-183)
      • modified residue (0)
      • modified residue (102)
      • modified residue (141)
    Domains in SCOPe 2.08: d1vgja_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1vgjA (A:)
    mrafiaidvnesvrdslvraqdyigskeakikfverenlhitlkflgeiteeqaeeikni
    lkkiaekykkhevkvkgigvfpnpnyirviwagiendeiiremareiedelaklgfkkeg
    nfvahitlgrvkfvkdklgltmklkelanedfgsfvvdaielkkstltpkgpiyetlarf
    else