PDB entry 1vg0

View 1vg0 on RCSB PDB site
Description: The crystal structures of the REP-1 protein in complex with monoprenylated Rab7 protein
Class: protein binding/protein transport
Keywords: rab prenylation, post-translational modification, protein binding/protein transport complex
Deposited on 2004-04-22, released 2004-07-20
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.188
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Rab proteins geranylgeranyltransferase component A 1
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P37727
      • engineered (230)
      • engineered (461)
      • engineered (472)
      • engineered (482)
    Domains in SCOPe 2.01: d1vg0a1, d1vg0a2
  • Chain 'B':
    Compound: Ras-related protein Rab-7
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1vg0b_
  • Heterogens: MG, CL, GER, GDP, PG4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vg0A (A:)
madnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlk
eyqenndvvtensmwqeqileneeaiplsskdktiqhvevfcyasqdlhkdveeagalqk
nhasvtsaqsaeaaeaaetsclptaveplsmgsceipaeqsqcpgpesspevndaeatgk
kensdakssteepsenvpkvqdntetpkknritysqiikegrrfnidlvskllysrglli
dlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmkfltfcv
eyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamtsettsctvdglkatkkflq
clgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkckavidqf
gqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsiltvpaeepg
sfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteieaeneqvek
prllwalyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfqqicpned
fcpappnpedivldgdssqqevpessvtpetnsetpkestvlgnpeepse

    Sequence, based on observed residues (ATOM records): (download) 
    >1vg0A (A:)
dnlpsdfdvivigtglpesiiaaacsrsgqrvlhvdsrsyyggnwasfsfsgllswlkey
qmwqeqileneeaiplsskdktiqhvevfcyasqritysqiikegrrfnidlvskllysr
gllidlliksnvsryaefknitrilafregtveqvpcsradvfnskqltmvekrmlmkfl
tfcveyeehpdeyrayegttfseylktqkltpnlqyfvlhsiamettsctvdglkatkkf
lqclgrygntpflfplygqgelpqcfcrmcavfggiyclrhsvqclvvdkesrkckavid
qfgqriiskhfiiedsylsentcsrvqyrqisravlitdgsvlrtdadqqvsiltvpaee
pgsfavrvielcsstmtcmkgtylvhltcmssktaredlervvqklftpyteiekprllw
alyfnmrdssdisrdcyndlpsnvyvcsgpdsglgndnavkqaetlfqqicpnedfcpap
p

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vg0B (B:)
mtsrkkvllkviilgdsgvgktslmnqyvnkkfsnqykatigadfltkevmvddrlvtmq
iwdtagqerfqslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpf
vvlgnkidlenrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetev
elynefpepikldknerakasaescsc

    Sequence, based on observed residues (ATOM records): (download) 
    >1vg0B (B:)
kvllkviilgdsgvgktslmnqyvnkkfsnigadfltkevmvddrlvtmqiwdtagqerf
qslgvafyrgadccvlvfdvtapntfktldswrdefliqasprdpenfpfvvlgnkidle
nrqvatkraqawcysknnipyfetsakeainveqafqtiarnalkqetevelynefpepi
kl