PDB entry 1vfb

View 1vfb on RCSB PDB site
Description: bound water molecules and conformational stabilization help mediate an antigen-antibody association
Class: immunoglobulin/hydrolase(o-glycosyl)
Keywords: immunoglobulin/hydrolase(o-glycosyl)
Deposited on 1993-12-03, released 1994-05-31
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.185
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: igg1-kappa d1.3 fv (light chain)
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • GB AAB30177 (0-106)
      • conflict (2)
      • conflict (49-51)
      • conflict (95)
    Domains in SCOPe 2.03: d1vfba_
  • Chain 'B':
    Compound: igg1-kappa d1.3 fv (heavy chain)
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • GB AAA69766 (0-115)
      • conflict (111)
    Domains in SCOPe 2.03: d1vfbb_
  • Chain 'C':
    Compound: hen egg white lysozyme
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1vfbc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1vfbA (A:)
    divltqspaslsasvgetvtitcrasgnihnylawyqqkqgkspqllvyytttladgvps
    rfsgsgsgtqyslkinslqpedfgsyycqhfwstprtfgggtkleik
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1vfbB (B:)
    qvqlqesgpglvapsqslsitctvsgfsltgygvnwvrqppgkglewlgmiwgdgntdyn
    salksrlsiskdnsksqvflkmnslhtddtaryycarerdyrldywgqgttltvss
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1vfbC (C:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl