PDB entry 1vez

View 1vez on RCSB PDB site
Description: Crystal Structure of Peptide Deformylase from Leptospira Interrogans(LiPDF) at pH8.0
Class: hydrolase
Keywords: closed conformation, HYDROLASE
Deposited on 2004-04-06, released 2005-08-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.217
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide deformylase
    Species: Leptospira interrogans [TaxId:173]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1veza_
  • Chain 'B':
    Compound: Peptide deformylase
    Species: Leptospira interrogans [TaxId:173]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vezb_
  • Heterogens: ZN, TRS, FMT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vezA (A:)
svrkilrmgdpilrkisepvtedeiqtkefkklirdmfdtmrhaegvglaapqigilkqi
vvvgsednerypgtpdvperiilnpvitpltkdtsgfwegclsvpgmrgyverpnqirmq
wmdekgnqfdetidgykaivyqhecdhlqgilyvdrlkdtklfgfnetldsshnvld

    Sequence, based on observed residues (ATOM records): (download) 
    >1vezA (A:)
svrkilrmgdpilrkisepvtedeiqtkefkklirdmfdtmrhaegvglaapqigilkqi
vvvgsednerypgtpdvperiilnpvitpltkdtsgfwegclsvpgmrgyverpnqirmq
wmdekgnqfdetidgykaivyqhecdhlqgilyvdrlkdtklfgfnetldss

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vezB (B:)
svrkilrmgdpilrkisepvtedeiqtkefkklirdmfdtmrhaegvglaapqigilkqi
vvvgsednerypgtpdvperiilnpvitpltkdtsgfwegclsvpgmrgyverpnqirmq
wmdekgnqfdetidgykaivyqhecdhlqgilyvdrlkdtklfgfnetldsshnvld

    Sequence, based on observed residues (ATOM records): (download) 
    >1vezB (B:)
svrkilrmgdpilrkisepvtedeiqtkefkklirdmfdtmrhaegvglaapqigilkqi
vvvgsednerypgtpdvperiilnpvitpltkdtsgfwegclsvpgmrgyverpnqirmq
wmdekgnqfdetidgykaivyqhecdhlqgilyvdrlkdtklfgfnetlds