PDB entry 1vcl
View 1vcl on RCSB PDB site
Description: Crystal Structure of Hemolytic Lectin CEL-III
Class: toxin
Keywords: LECTIN, CEL-III, HEMOLYSIS, HEMAGGLUTINATION, PORE-FORMING, CALCIUM, toxin
Deposited on
2004-03-09, released
2004-09-07
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-12-25, with a file datestamp of
2019-12-20.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hemolytic lectin CEL-III
Species: Cucumaria echinata [TaxId:40245]
Database cross-references and differences (RAF-indexed):
- Uniprot Q868M7 (0-431)
- see remark 999 (14-15)
- see remark 999 (35)
- see remark 999 (47)
- see remark 999 (91)
- see remark 999 (94)
- see remark 999 (96)
- see remark 999 (121)
- see remark 999 (145)
- see remark 999 (172)
- see remark 999 (203)
- see remark 999 (339)
- see remark 999 (403)
Domains in SCOPe 2.08: d1vcla1, d1vcla2, d1vcla3 - Chain 'B':
Compound: hemolytic lectin CEL-III
Species: Cucumaria echinata [TaxId:40245]
Database cross-references and differences (RAF-indexed):
- Uniprot Q868M7 (0-431)
- see remark 999 (14-15)
- see remark 999 (35)
- see remark 999 (47)
- see remark 999 (91)
- see remark 999 (94)
- see remark 999 (96)
- see remark 999 (121)
- see remark 999 (145)
- see remark 999 (172)
- see remark 999 (203)
- see remark 999 (339)
- see remark 999 (403)
Domains in SCOPe 2.08: d1vclb1, d1vclb2, d1vclb3 - Heterogens: CA, MG, CL, BTB, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1vclA (A:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1vclB (B:)
evlctnpldigelrsfkskqcvdivgnqgsgniatydcdglsdqqiiicgdgtirnearn
ycftpdgsgnanvmsspctlypeipssqrwrqgrrktftdnggieqvateiinlasgkcl
diegsdgtgdigvydcqnlddqyfyvrsrgpelfygrlrneksdlcldvegsdgkgnvlm
yscednldqwfryyengeivnaksgmcldvegsdgsgnvgiyrcddlrdqmwsrpnaycn
gdycsflnkesnkcldvsgdqgtgdvgtwqcdglpdqrfkwvfddwevptatwnmvgcdq
ngkvsqqisntisfsstvtagvavevsstiekgvifakatvsvkvtaslskawtnsqsgt
taitytcdnydsdeeftrgcmwqlaiettevksgdllvwnpqivkctrsntapgcapftk
canedctfctdi