PDB entry 1vbn

View 1vbn on RCSB PDB site
Description: Escherichia coli tyrosyl-tRNA synthetase mutant complexed with Tyr-AMS
Class: Ligase
Keywords: Ligase, Structural Genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on 2004-02-27, released 2005-01-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-09-28, with a file datestamp of 2016-09-23.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tyrosyl-tRNA synthetase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00951 (0-317)
      • engineered (32)
      • engineered (190)
    Domains in SCOPe 2.07: d1vbna_
  • Chain 'B':
    Compound: Tyrosyl-tRNA synthetase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00951 (0-317)
      • engineered (32)
      • engineered (190)
    Domains in SCOPe 2.07: d1vbnb_
  • Heterogens: YSA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1vbnA (A:)
    nlikqlqerglvaqvtdeealaerlaqgpialvcgfdptadslhlghlvpllclkrfqqa
    ghkpvalvggatgligdpsfkaaerklnteetvqewvdkirkqvapfldfdcgensaiaa
    nnydwfgnmnvltflrdigkhfsvnqminkeavkqrlnredqgisftefsynllqgydfa
    clnkqygvvlciggsdqwgnitsgidltrrlhqnqvfgltvplitkadgtkfgkteggav
    wldpkktspykfyqfwintadadvyrflkfftfmsieeinaleeedknsgkapraqyvla
    eqvtrlvhgeeglqaakr
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1vbnB (B:)
    nlikqlqerglvaqvtdeealaerlaqgpialvcgfdptadslhlghlvpllclkrfqqa
    ghkpvalvggatgligdpsfkaaerklnteetvqewvdkirkqvapfldfdcgensaiaa
    nnydwfgnmnvltflrdigkhfsvnqminkeavkqrlnredqgisftefsynllqgydfa
    clnkqygvvlciggsdqwgnitsgidltrrlhqnqvfgltvplitkadgtkfgkteggav
    wldpkktspykfyqfwintadadvyrflkfftfmsieeinaleeedknsgkapraqyvla
    eqvtrlvhgeeglqaakr