PDB entry 1vba

View 1vba on RCSB PDB site
Description: poliovirus (type 3, sabin strain) (p3/sabin, p3/leon/12a(1)b) complexed with r78206
Class: Virus
Keywords: VIRUS COAT PROTEIN, HYDROLASE, THIOL PROTEASE, Icosahedral virus
Deposited on 1996-01-02, released 1996-07-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.297
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '0':
    Compound: poliovirus type 3
    Species: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B) [TaxId:12088]
    Database cross-references and differences (RAF-indexed):
    • PDB 1VBA (0-3)
  • Chain '1':
    Compound: poliovirus type 3
    Species: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B) [TaxId:12088]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vba1_
  • Chain '2':
    Compound: poliovirus type 3
    Species: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B) [TaxId:12088]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vba.1
  • Chain '3':
    Compound: poliovirus type 3
    Species: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B) [TaxId:12088]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vba3_
  • Chain '4':
    Compound: poliovirus type 3
    Species: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B) [TaxId:12088]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1vba.1
  • Heterogens: MYR, J78

PDB Chain Sequences:

  • Chain '0':
    No sequence available.

  • Chain '1':
    Sequence, based on SEQRES records: (download) 
    >1vba1 (1:)
giedlisevaqgaltlslpkqqdslpdtkasgpahskevpaltavetgatnplapsdtvq
trhvvqrrsrsestiesffargacvaiievdneqpttraqklfamwritykdtvqlrrkl
efftysrfdmeftfvvtanftnannghalnqvyqimyippgaptpkswddytwqtssnps
ifytygaaparisvpyvglanayshfydgfakvplktdandqigdslysamtvddfgvla
vrvvndhnptkvtskvriymkpkhvrvwcprppravpyygpgvdyrnnldplsekgltty

    Sequence, based on observed residues (ATOM records): (download) 
    >1vba1 (1:)
qdslpdtkasgpahskevpaltavetgatnplapsdtvqtrhvvqrrsrsestiesffar
gacvaiievdneqpttraqklfamwritykdtvqlrrklefftysrfdmeftfvvtanft
nannghalnqvyqimyippgaptpkswddytwqtssnpsifytygaaparisvpyvglan
ayshfydgfakvplktdandqigdslysamtvddfgvlavrvvndhnptkvtskvriymk
pkhvrvwcprppravpyygpgvdyrnnldplsekgltty

  • Chain '2':
    Sequence, based on SEQRES records: (download) 
    >1vba2 (2:)
spnveacgysdrvlqltlgnstittqeaansvvaygrwpefirddeanpvdqptepdvat
crfytldtvmwgkeskgwwwklpdalrdmglfgqnmyyhylgrsgytvhvqcnaskfhqg
algvfaipeyclagdsdkqrytsyananpgerggkfysqfnkdnavtspkrefcpvdyll
gcgvllgnafvyphqiinlrtnnsativlpyvnalaidsmvkhnnwgiailplspldfaq
dssveipitvtiapmcsefnglrnvtapkfq

    Sequence, based on observed residues (ATOM records): (download) 
    >1vba2 (2:)
acgysdrvlqltlgnstittqeaansvvaygrwpefirddeanpvdqptepdvatcrfyt
ldtvmwgkeskgwwwklpdalrdmglfgqnmyyhylgrsgytvhvqcnaskfhqgalgvf
aipeyclagdsdkqrytsyananpgerggkfysqfnkdnavtspkrefcpvdyllgcgvl
lgnafvyphqiinlrtnnsativlpyvnalaidsmvkhnnwgiailplspldfaqdssve
ipitvtiapmcsefnglrnvtapkfq

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1vba3 (3:)
glpvlntpgsnqyltsdnhqspcaipefdvtppidipgevknmmelaeidtmiplnlest
krntmdmyrvtlsdsadlsqpilclslspafdprlshtmlgevlnyythwagslkftflf
cgsmmatgkilvayappgaqpptsrkeamlgthviwdlglqssctmvvpwisnvtyrqtt
qdsfteggyismfyqtrivvplstpksmsmlgfvsacndfsvrllrdtthisqsa

  • Chain '4':
    Sequence, based on SEQRES records: (download) 
    >1vba4 (4:)
gaqvssqkvgahensnrayggstinyttinyykdsasnaaskqdysqdpskfteplkdvl
iktapaln

    Sequence, based on observed residues (ATOM records): (download) 
    >1vba4 (4:)
gaqvssqkvgahensstinyttinyykdsasnaaskqdysqdpskfteplkdvliktapa
ln