PDB entry 1v25

View 1v25 on RCSB PDB site
Description: Crystal structure of tt0168 from Thermus thermophilus HB8
Class: ligase
Keywords: LIGASE, STRUCTURAL GENOMICS, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on 2003-10-07, released 2004-07-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.208
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: long-chain-fatty-acid-CoA synthetase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1v25a_
  • Chain 'B':
    Compound: long-chain-fatty-acid-CoA synthetase
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1v25b_
  • Heterogens: MG, ANP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1v25A (A:)
megermnafpstmmdeelnlwdfleraaalfgrkevvsrlhtgevhrttyaevyqrarrl
mgglralgvgvgdrvatlgfnhfrhleayfavpgmgavlhtanprlspkeiayilnhaed
kvllfdpnllplveairgelktvqhfvvmdekapegylayeealgeeadpvrvperaacg
mayttgttglpkgvvyshralvlhslaaslvdgtalsekdvvlpvvpmfhvnawclpyaa
tlvgakqvlpgprldpaslvelfdgegvtftagvptvwlaladylestghrlktlrrlvv
ggsaaprsliarfermgvevrqgygltetspvvvqnfvkshleslseeekltlkaktglp
iplvrlrvadeegrpvpkdgkalgevqlkgpwitggyygneeatrsaltpdgffrtgdia
vwdeegyveikdrlkdliksggewissvdlenalmghpkvkeaavvaiphpkwqerplav
vvprgekptpeelnehllkagfakwqlpdayvfaeeiprtsagkflkralreqyknyygg
a

    Sequence, based on observed residues (ATOM records): (download) 
    >1v25A (A:)
afpstmmdeelnlwdfleraaalfgrkevvsrlhtgevhrttyaevyqrarrlmgglral
gvgvgdrvatlgfnhfrhleayfavpgmgavlhtanprlspkeiayilnhaedkvllfdp
nllplveairgelktvqhfvvmdekapegylayeealgeeadpvrvperaacgmayttgt
tglpkgvvyshralvlhslaaslvdgtalsekdvvlpvvpmfhvnawclpyaatlvgakq
vlpgprldpaslvelfdgegvtftagvptvwlaladylestghrlktlrrlvvggsaapr
sliarfermgvevrqgygltetspvvvqnfvkshleslseeekltlkaktglpiplvrlr
vadeegrpvpkdgkalgevqlkgpwitggyygneeatrsaltpdgffrtgdiavwdeegy
veikdrlkdliksggewissvdlenaavvaiphpkwqerplavvgfakwqlpdaylkral
reqyknyygga

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1v25B (B:)
megermnafpstmmdeelnlwdfleraaalfgrkevvsrlhtgevhrttyaevyqrarrl
mgglralgvgvgdrvatlgfnhfrhleayfavpgmgavlhtanprlspkeiayilnhaed
kvllfdpnllplveairgelktvqhfvvmdekapegylayeealgeeadpvrvperaacg
mayttgttglpkgvvyshralvlhslaaslvdgtalsekdvvlpvvpmfhvnawclpyaa
tlvgakqvlpgprldpaslvelfdgegvtftagvptvwlaladylestghrlktlrrlvv
ggsaaprsliarfermgvevrqgygltetspvvvqnfvkshleslseeekltlkaktglp
iplvrlrvadeegrpvpkdgkalgevqlkgpwitggyygneeatrsaltpdgffrtgdia
vwdeegyveikdrlkdliksggewissvdlenalmghpkvkeaavvaiphpkwqerplav
vvprgekptpeelnehllkagfakwqlpdayvfaeeiprtsagkflkralreqyknyygg
a

    Sequence, based on observed residues (ATOM records): (download) 
    >1v25B (B:)
afpstmmdeelnlwdfleraaalfgrkevvsrlhtgevhrttyaevyqrarrlmgglral
gvgvgdrvatlgfnhfrhleayfavpgmgavlhtanprlspkeiayilnhaedkvllfdp
nllplveairgelktvqhfvvmdekapegylayeealgeeadpvrvperaacgmayttgt
tglpkgvvyshralvlhslaaslvdgtalsekdvvlpvvpmfhvnawclpyaatlvgakq
vlpgprldpaslvelfdgegvtftagvptvwlaladylestghrlktlrrlvvggsaapr
sliarfermgvevrqgygltetspvvvqnfvkshleslseeekltlkaktglpiplvrlr
vadeegrpvpkdgkalgevqlkgpwitggyygneeatrsaltpdgffrtgdiavwdeegy
veikdrlkdliksggewissvdlenalmghaavvaiphpkwqerplavnehllkagfakw
qlpdayvfgkflkralreqyknyygga