PDB entry 1uvq
View 1uvq on RCSB PDB site
Description: crystal structure of hla-dq0602 in complex with a hypocretin peptide
Class: immunology
Keywords: immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics
Deposited on
2004-01-22, released
2004-02-05
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.189
AEROSPACI score: 0.52
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hla class II histocompatibility antigen
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot P01907
- PDB 1UVQ (12-27)
Domains in SCOPe 2.05: d1uvqa1, d1uvqa2 - Chain 'B':
Compound: hla class II histocompatibility antigen
Domains in SCOPe 2.05: d1uvqb1, d1uvqb2 - Chain 'C':
Compound: orexin
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: GLY, NAG, ZN, ACY, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1uvqA (A:)
edivadhvascgvnlyqfygpsgqythefdgdeqfyvdlerketawrwpefskfggfdpq
galrnmavakhnlnimikrynstaatnevpevtvfskspvtlgqpntliclvdnifppvv
nitwlsngqsvtegvsetsflsksdhsffkisyltflpsadeiydckvehwgldqpllkh
wepeipapmseltetvd
Sequence, based on observed residues (ATOM records): (download)
>1uvqA (A:)
divadhvascgvnlyqfygpsgqythefdgdeqfyvdlerketawrwpefskfggfdpqg
alrnmavakhnlnimikrynstaatnevpevtvfskspvtlgqpntliclvdnifppvvn
itwlsngqsvtegvsetsflsksdhsffkisyltflpsadeiydckvehwgldqpllkhw
ep
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1uvqB (B:)
spedfvfqfkgmcyftngtervrlvtryiynreeyarfdsdvgvyravtpqgrpdaeywn
sqkevlegtraeldtvcrhnyevafrgilqrrveptvtispsrtealnhhnllvcsvtdf
ypgqikvrwfrndqeetagvvstplirngdwtfqilvmlemtpqrgdvytchvehpslqs
pitvewraqsesaqskvd
Sequence, based on observed residues (ATOM records): (download)
>1uvqB (B:)
spedfvfqfkgmcyftngtervrlvtryiynreeyarfdsdvgvyravtpqgrpdaeywn
sqkevlegtraeldtvcrhnyevafrgilqrrveptvtispsnllvcsvtdfypgqikvr
wfrndqeetagvvstplirngdwtfqilvmlemtpqrgdvytchvehpslqspitvewra
q
- Chain 'C':
No sequence available.