PDB entry 1utv

View 1utv on RCSB PDB site
Description: The structure of the trp RNA-binding attenuation protein (TRAP) bound to a RNA molecule containing UAGAU repeats (part II)
Class: RNA binding protein
Keywords: RNA binding protein, transcription attenuation, RNA-binding protein, trp RNA
Deposited on 2003-12-08, released 2004-01-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.186
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '0':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '1':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '2':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '3':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '4':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '5':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '6':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '7':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '8':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain '9':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Chain 'A':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utva_
  • Chain 'B':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvb_
  • Chain 'C':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvc_
  • Chain 'D':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvd_
  • Chain 'E':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utve_
  • Chain 'F':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvf_
  • Chain 'G':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvg_
  • Chain 'H':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvh_
  • Chain 'I':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvi_
  • Chain 'J':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvj_
  • Chain 'K':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvk_
  • Chain 'L':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvl_
  • Chain 'M':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvm_
  • Chain 'N':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvn_
  • Chain 'O':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvo_
  • Chain 'P':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvp_
  • Chain 'Q':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvq_
  • Chain 'R':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvr_
  • Chain 'S':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvs_
  • Chain 'T':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvt_
  • Chain 'U':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvu_
  • Chain 'V':
    Compound: transcription attenuation protein mtrb
    Species: BACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1utvv_
  • Chain 'Z':
    Compound: 5'-r(*up*ap*gp*ap*up)-3'
    Species: synthetic, synthetic
  • Heterogens: TRP, HOH

PDB Chain Sequences:

  • Chain '0':
    No sequence available.

  • Chain '1':
    No sequence available.

  • Chain '2':
    No sequence available.

  • Chain '3':
    No sequence available.

  • Chain '4':
    No sequence available.

  • Chain '5':
    No sequence available.

  • Chain '6':
    No sequence available.

  • Chain '7':
    No sequence available.

  • Chain '8':
    No sequence available.

  • Chain '9':
    No sequence available.

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1utvA (A:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvA (A:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgviesegk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1utvB (B:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvB (B:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgviesegk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1utvC (C:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvC (C:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1utvD (D:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvD (D:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgviesegk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1utvE (E:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvE (E:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1utvF (F:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvF (F:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1utvG (G:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvG (G:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1utvH (H:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvH (H:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1utvI (I:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvI (I:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1utvJ (J:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvJ (J:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1utvK (K:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvK (K:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1utvL (L:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvL (L:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >1utvM (M:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvM (M:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgviesegk

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >1utvN (N:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvN (N:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >1utvO (O:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvO (O:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'P':
    Sequence, based on SEQRES records: (download) 
    >1utvP (P:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvP (P:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'Q':
    Sequence, based on SEQRES records: (download) 
    >1utvQ (Q:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvQ (Q:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'R':
    Sequence, based on SEQRES records: (download) 
    >1utvR (R:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvR (R:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'S':
    Sequence, based on SEQRES records: (download) 
    >1utvS (S:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvS (S:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'T':
    Sequence, based on SEQRES records: (download) 
    >1utvT (T:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvT (T:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'U':
    Sequence, based on SEQRES records: (download) 
    >1utvU (U:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvU (U:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'V':
    Sequence, based on SEQRES records: (download) 
    >1utvV (V:)
mytnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkay
iqtrhgviesegkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1utvV (V:)
tnsdfvvikaledgvnvigltrgadtrfhhsekldkgevliaqftehtsaikvrgkayiq
trhgvieseg

  • Chain 'Z':
    No sequence available.