SCOP 1.69: Structural Classification of Proteins — extended

PDB entry 1up6

View 1up6 on RCSB PDB site
Description: structure of the 6-phospho-beta glucosidase from thermotoga maritima at 2.55 angstrom resolution in the tetragonal form with manganese, nad+ and glucose-6-phosphate
Deposited on 2003-09-29, released 2004-08-02
The last revision prior to the SCOP 1.69 freeze date was dated 2004-08-02, with a file datestamp of 2004-08-02.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.20222
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Domains in SCOP 1.69: d1up6a1, d1up6a2
Chain 'B':
Domains in SCOP 1.69: d1up6b1, d1up6b2
Chain 'C':
Domains in SCOP 1.69: d1up6c1, d1up6c2
Chain 'D':
Domains in SCOP 1.69: d1up6d1, d1up6d2
Chain 'E':
Domains in SCOP 1.69: d1up6e1, d1up6e2
Chain 'F':
Domains in SCOP 1.69: d1up6f1, d1up6f2
Chain 'G':
Domains in SCOP 1.69: d1up6g1, d1up6g2
Chain 'H':
Domains in SCOP 1.69: d1up6h1, d1up6h2

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1up6A (A:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6A (A:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklpdedfptwfydsvrlivnpyl
ryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaahli
rdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfihav
kmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Chain 'B':
Sequence, based on SEQRES records: (download)

>1up6B (B:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6B (B:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklipdedfptwfydsvrlivnpy
lryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltsmystaaahlirdl
etdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfihavkmy
erltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Chain 'C':
Sequence, based on SEQRES records: (download)

>1up6C (C:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6C (C:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlkldedfptwfydsvrlivnpylryy
lmekkmfkkisthelrarevmkiekelfekyrtaveipeeltgsmystaaahlirdletd
egkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfihavkmyerl
tieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Chain 'D':
Sequence, based on SEQRES records: (download)

>1up6D (D:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6D (D:)
mriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkvl
isdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpiv
eeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsarl
edvflkyyglnhlsfiekvfvkgedvtekvfenlklpdedfptwfydsvrlivnpylryy
lmekkmfkkisthelrarevmkiekelfekyrtaveipegsmystaaahlirdletdegk
ihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfihavkmyerltie
aylkrskklalkallshplgpdvedakdlleeileanreyvklg

Chain 'E':
Sequence, based on SEQRES records: (download)

>1up6E (E:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6E (E:)
mriavigggssytpelvkglldisedvridevifydideekqkivvdfkrlvrfkvlisd
tfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpiveey
vdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsarledv
flkyyglnhlsfiekvfvkgedvtekvfenlkdedfptwfydsvrlivnpylryylmekk
mfkkisthelrarevmkiekelfekpeelstaaahlirdletdegkihivntrnngsien
lpddyvleipcyvrsgrvhtlsqgkgdhfalsfihavkmyerltieaylkrskklalkal
lshplgpdvedakdlleeileanreyvklg

Chain 'F':
Sequence, based on SEQRES records: (download)

>1up6F (F:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6F (F:)
mriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkvl
isdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpiv
eeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsarl
edvflkyyglnhlsfiekvfvkgedvtekvfenlklkedfptwfydsvrlivnpylryyl
mekkmfkkisthelrarevmkiekelfekyrtaveipestaaahlirdletdegkihivn
trnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfihavkmyerltieaylkr
skklalkallshplgpdvedakdlleeileanreyvklg

Chain 'G':
Sequence, based on SEQRES records: (download)

>1up6G (G:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6G (G:)
mriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkvl
isdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpiv
eeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsarl
edvflkyyglnhlsfiekvfvkgedvtekvfenlklklsdfptwfydsvrlivnpylryy
lmekkmfkkisthelrarevmkiekelfekyrtaveipeesmystaaahlirdletdegk
ihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfihavkmyerltie
aylkrskklalkallshplgpdvedakdlleeileanreyvklg

Chain 'H':
Sequence, based on SEQRES records: (download)

>1up6H (H:)
hmriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkv
lisdtfegavvdakyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpi
veeyvdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsar
ledvflkyyglnhlsfiekvfvkgedvtekvfenlklklsnipdedfptwfydsvrlivn
pylryylmekkmfkkisthelrarevmkiekelfekyrtaveipeeltkrggsmystaaa
hlirdletdegkihivntrnngsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfi
havkmyerltieaylkrskklalkallshplgpdvedakdlleeileanreyvklg

Sequence, based on observed residues (ATOM records): (download)

>1up6H (H:)
mriavigggssytpelvkglldisedvridevifydideekqkivvdfvkrlvkdrfkvl
isdtfegavvyvifqfrpgglkgrendegiplkygligqettgvggfsaalrafpiveey
vdtvrktsnativnftnpsghitefvrnyleyekfiglcnvpinfireiaemfsarledv
flkyyglnhlsfiekvfvkgedvtekvfenlkledfptwfydsvrlivnpylryylmekk
mfkkisthelrarevmkiekelfekyrtaveipestaaahlirdletdegkihivntrnn
gsienlpddyvleipcyvrsgrvhtlsqgkgdhfalsfihavkmyerltieaylkrskkl
alkallshplgpdvedakdlleeileanreyvklg