PDB entry 1ufi
View 1ufi on RCSB PDB site
Description: Crystal structure of the dimerization domain of human CENP-B
Class: DNA binding protein
Keywords: dimerization domain, salt bridge, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, DNA BINDING PROTEIN
Deposited on
2003-05-30, released
2004-02-17
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.236
AEROSPACI score: 0.52
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: major centromere autoantigen b
Species: Homo sapiens [TaxId:9606]
Gene: CENPB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ufia_ - Chain 'B':
Compound: major centromere autoantigen b
Species: Homo sapiens [TaxId:9606]
Gene: CENPB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ufib_ - Chain 'C':
Compound: major centromere autoantigen b
Species: Homo sapiens [TaxId:9606]
Gene: CENPB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ufic_ - Chain 'D':
Compound: major centromere autoantigen b
Species: Homo sapiens [TaxId:9606]
Gene: CENPB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ufid_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1ufiA (A:)
gshmpvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtrknharqagvrgl
ghqs
Sequence, based on observed residues (ATOM records): (download)
>1ufiA (A:)
hmpvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtrkn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1ufiB (B:)
gshmpvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtrknharqagvrgl
ghqs
Sequence, based on observed residues (ATOM records): (download)
>1ufiB (B:)
pvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtrkn
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1ufiC (C:)
gshmpvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtrknharqagvrgl
ghqs
Sequence, based on observed residues (ATOM records): (download)
>1ufiC (C:)
shmpvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtrk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1ufiD (D:)
gshmpvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtrknharqagvrgl
ghqs
Sequence, based on observed residues (ATOM records): (download)
>1ufiD (D:)
hmpvpsfgeamayfamvkryltsfpiddrvqshilhlehdlvhvtr