PDB entry 1udz

View 1udz on RCSB PDB site
Description: Isoleucyl-tRNA synthetase editing domain
Class: ligase
Keywords: aminoacyl-trna synthetase, CP1, editing, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, LIGASE
Deposited on 2003-05-08, released 2004-03-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-16, with a file datestamp of 2019-10-11.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: isoleucyl-tRNA synthetase
    Species: Thermus thermophilus [TaxId:274]
    Gene: iles
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56690 (Start-181)
      • see remark 999 (74)
      • see remark 999 (175)
    Domains in SCOPe 2.08: d1udza_
  • Chain 'B':
    Compound: isoleucyl-tRNA synthetase
    Species: Thermus thermophilus [TaxId:274]
    Gene: iles
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56690 (Start-181)
      • see remark 999 (74)
      • see remark 999 (175)
    Domains in SCOPe 2.08: d1udzb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1udzA (A:)
mqdpsvyvrfplkepkklglekaslliwtttpwtlpgnvaaavhpeytyaafqvgdeali
leeglgrkllgegtpvlktfpgkaleglpytppypqalekgyfvvladyvsqedgtgivh
qapafgaedletarvyglpllktvdeegkllvepfkglyfreanrailrdlrgrgflfke
es

    Sequence, based on observed residues (ATOM records): (download) 
    >1udzA (A:)
psvyvrfplkepkklglekaslliwtttpwtlpgnvaaavhpeytyaafqvgdealilee
glgrkllgegtpvlktfpgkaleglpytppypqalekgyfvvladyvsqedgtgivhqap
afgaedletarvyglpllktvdeegkllvepfkglyfreanrailrdlrgrgflfkees

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1udzB (B:)
mqdpsvyvrfplkepkklglekaslliwtttpwtlpgnvaaavhpeytyaafqvgdeali
leeglgrkllgegtpvlktfpgkaleglpytppypqalekgyfvvladyvsqedgtgivh
qapafgaedletarvyglpllktvdeegkllvepfkglyfreanrailrdlrgrgflfke
es

    Sequence, based on observed residues (ATOM records): (download) 
    >1udzB (B:)
psvyvrfplkepkklglekaslliwtttpwtlpgnvaaavhpeytyaafqvgdealilee
glgrkllgegtpvlktfpgkaleglpytppypqalekgyfvvladyvsqedgtgivhqap
afgaedletarvyglpllktvdeegkllvepfkglyfreanrailrdlrgrgflfkees