PDB entry 1ud9

View 1ud9 on RCSB PDB site
Description: Crystal Structure of Proliferating Cell Nuclear Antigen (PCNA) Homolog From Sulfolobus tokodaii
Class: DNA binding protein
Keywords: DNA-binding, DNA replication, DNA binding protein
Deposited on 2003-04-28, released 2004-06-15
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.68 Å
R-factor: 0.202
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase sliding clamp A
    Species: Sulfolobus tokodaii [TaxId:111955]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q975N2 (1-244)
      • see remark 999 (0)
    Domains in SCOPe 2.05: d1ud9a1, d1ud9a2
  • Chain 'B':
    Compound: DNA polymerase sliding clamp A
    Species: Sulfolobus tokodaii [TaxId:111955]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q975N2 (1-244)
      • see remark 999 (0)
    Domains in SCOPe 2.05: d1ud9b1, d1ud9b2
  • Chain 'C':
    Compound: DNA polymerase sliding clamp A
    Species: Sulfolobus tokodaii [TaxId:111955]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q975N2 (1-244)
      • see remark 999 (0)
    Domains in SCOPe 2.05: d1ud9c1, d1ud9c2
  • Chain 'D':
    Compound: DNA polymerase sliding clamp A
    Species: Sulfolobus tokodaii [TaxId:111955]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q975N2 (1-244)
      • see remark 999 (0)
    Domains in SCOPe 2.05: d1ud9d1, d1ud9d2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ud9A (A:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppe
vpevnlefdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdt
gsladiefnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyll
apkls

    Sequence, based on observed residues (ATOM records): (download) 
    >1ud9A (A:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppe
vplefdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdtgsl
adiefnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyllapk
ls

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ud9B (B:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppe
vpevnlefdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdt
gsladiefnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyll
apkls

    Sequence, based on observed residues (ATOM records): (download) 
    >1ud9B (B:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppe
fdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdtgsladie
fnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyllapkls

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ud9C (C:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppe
vpevnlefdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdt
gsladiefnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyll
apkls

    Sequence, based on observed residues (ATOM records): (download) 
    >1ud9C (C:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppl
efdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdtgsladi
efnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyllapkls

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ud9D (D:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppe
vpevnlefdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdt
gsladiefnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyll
apkls

    Sequence, based on observed residues (ATOM records): (download) 
    >1ud9D (D:)
ahivyddvrdlkaiiqallklvdealfdikpegiqlvaidkahislikielpkemfkeyd
vpeefkfgfntqymskllkaakrkeeiiidadspevvkltlsgalnrvfnvnnievlppv
nlefdikatinasglknaigeiaevadtllisgneekvvvkgegenkvevefskdtgsla
diefnkesssaydveylndiisltklsdyvkvafadqkpmqlefnmegggkvtyllapkl
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