PDB entry 1ubj
View 1ubj on RCSB PDB site
Description: Three-dimensional Structure of The Carbon Monoxide Complex of [NiFe]hydrogenase From Desulufovibrio vulgaris Miyazaki F
Class: oxidoreductase
Keywords: High resolution crystal structure, [NiFe]hydrogenase, Oxidoreductase, Carbon Monoxide Complex
Deposited on
2003-04-04, released
2003-04-29
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: 0.133
AEROSPACI score: 0.73
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'L':
Compound: Periplasmic [NiFe] hydrogenase Large subunit
Species: Desulfovibrio vulgaris str. 'Miyazaki F' [TaxId:883]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1ubjl_ - Chain 'S':
Compound: Periplasmic [NiFe] hydrogenase Small subunit
Species: Desulfovibrio vulgaris str. 'Miyazaki F' [TaxId:883]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1ubjs_ - Heterogens: MG, SF4, F3S, FNE, CMO, HOH
PDB Chain Sequences:
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1ubjL (L:)
ssysgpivvdpvtrieghlrievevengkvknayssstlfrgleiilkgrdprdaqhftq
rtcgvctythalastrcvdnavgvhipknatyirnlvlgaqylhdhivhfyhlhaldfvd
vtaalkadpakaakvassisprkttaadlkavqdklktfvetgqlgpftnayflgghpay
yldpetnliatahylealrlqvkaaramavfgaknphtqftvvggvtcydaltpqriaef
ealwketkafvdevyipdllvvaaaykdwtqyggtdnfitfgefpkdeydlnsrffkpgv
vfkrdfknikpfdkmqieehvrhswyegaearhpwkgqtqpkytdlhgddryswmkapry
mgepmetgplaqvliaysqghpkvkavtdavlaklgvgpealfstlgrtaargietavia
eyvgvmlqeykdniakgdnvicapwempkqaegvgfvnaprgglshwiriedgkignfql
vvpstwtlgprcdknklspveasligtpvadakrpveilrtvhsfdpciacgvh
- Chain 'S':
Sequence; same for both SEQRES and ATOM records: (download)
>1ubjS (S:)
lmgprrpsvvylhnaectgcsesvlrafepyidtlildtlsldyhetimaaagdaaeaal
eqavnsphgfiavveggiptaangiygkvanhtmldicsrilpkaqaviaygtcatfggv
qaakpnptgakgvndalkhlgvkainiagcppnpynlvgtivyylknkaapeldslnrpt
mffgqtvheqcprlphfdagefapsfeseearkgwclyelgckgpvtmnncpkikfnqtn
wpvdaghpcigcsepdfwdamtpfyqn