SCOPe 2.07: Structural Classification of Proteins

PDB entry 1u8r

View 1u8r on RCSB PDB site
Description: Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions
Class: metal-binding protein,Transcription/DNA
Keywords: IdeR, iron-dependent regulator, iron acquisition, siderophores, Mycobacterium tuberculosis, metal-binding protein,Transcription/DNA COMPLEX
Deposited on 2004-08-06, released 2004-10-05
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.23
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8ra1, d1u8ra2, d1u8ra3
Chain 'B':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8rb1, d1u8rb2, d1u8rb3
Chain 'C':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8rc1, d1u8rc2, d1u8rc3
Chain 'D':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8rd1, d1u8rd2, d1u8rd3
Chain 'E':
Compound: mbtA operator DNA
Chain 'F':
Compound: mbtB operator DNA
Chain 'G':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8rg1, d1u8rg2, d1u8rg3
Chain 'H':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8rh1, d1u8rh2, d1u8rh3
Chain 'I':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8ri1, d1u8ri2, d1u8ri3
Chain 'J':
Compound: iron-dependent repressor ider
Species: Mycobacterium tuberculosis [TaxId:1773]
Gene: ideR, dtxR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A672 (0-229)
  - see remark 999 (135)
Domains in SCOPe 2.07: d1u8rj1, d1u8rj2, d1u8rj3
Chain 'K':
Compound: mbtA operator DNA
Chain 'L':
Compound: mbtB operator DNA
Heterogens: CO, NA, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1u8rA (A:)
mnelvdttemylrtiydleeegvtplrariaerldqsgptvsqtvsrmerdgllrvagdr
hleltekgralaiavmrkhrlaerllvdviglpweevhaeacrwehvmsedverrlvkvl
nnpttspfgnpipgldelgvgpepgaddanlvrltelpagspvavvvrqltehvqgdidl
itrlkdagvvpnarvtvettpgggvtivipghenvtlphemahavkvekv