PDB entry 1u41
View 1u41 on RCSB PDB site
Description: Crystal stucture of YLGV mutant of dimerisation domain of NF-kB p50 transcription factor
Class: transcription
Keywords: transcription factor; nf-kb; dimerization domain; intertwined folding
Deposited on
2004-07-23, released
2004-08-17
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-19.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.176
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Nuclear factor NF-kappa-B p105 subunit
Species: Mus musculus [TaxId:10090]
Gene: Nfkb1, 18033
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1u41a_ - Chain 'B':
Compound: Nuclear factor NF-kappa-B p105 subunit
Species: Mus musculus [TaxId:10090]
Gene: Nfkb1, 18033
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1u41b_ - Chain 'C':
Compound: Nuclear factor NF-kappa-B p105 subunit
Species: Mus musculus [TaxId:10090]
Gene: Nfkb1, 18033
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1u41c_ - Chain 'D':
Compound: Nuclear factor NF-kappa-B p105 subunit
Species: Mus musculus [TaxId:10090]
Gene: Nfkb1, 18033
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1u41d_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1u41A (A:)
asnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvh
rqfgivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype
Sequence, based on observed residues (ATOM records): (download)
>1u41A (A:)
nlkivrmdrtagcvtggeeiyllcdkvqkddiirfyeeeenggvwegfgdfsptdvhrqf
givfktpkykdvnitkpasvfvqlrrksdletsepkpflyype
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1u41B (B:)
asnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvh
rqfgivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype
Sequence, based on observed residues (ATOM records): (download)
>1u41B (B:)
nlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeegvwegfgdfsptdvhrqfgi
vfktpkykdvnitkpasvfvqlrrksdletsepkpflyype
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1u41C (C:)
asnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvh
rqfgivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype
Sequence, based on observed residues (ATOM records): (download)
>1u41C (C:)
lkivrmdrtagcvtggeeiyllcdkvqkddiqirfyevwegfgdfsptdvhrqfgivfkt
pkykdvnitkpasvfvqlrrksdletsepkpflyype
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1u41D (D:)
asnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvh
rqfgivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype
Sequence, based on observed residues (ATOM records): (download)
>1u41D (D:)
asnlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeegvwegfgdfsptdvhrqf
givfktpkykdvnitkpasvfvqlrrksdletsepkpflyype