PDB entry 1u15

View 1u15 on RCSB PDB site
Description: Crystal structure of a duck-delta-crystallin-1 double loop mutant (DLM)
Class: lyase
Keywords: eye lens protein, duck-delta-crystallin, argininosuccinate lyase, enzyme mechanism
Deposited on 2004-07-14, released 2004-10-05
The last revision prior to the SCOP 1.73 freeze date was dated 2004-10-05, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.221
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: delta crystallin I
    Species: Anas platyrhynchos
    Database cross-references and differences (RAF-indexed):
    • Uniprot P24057
      • engineered (21-22)
      • engineered (24-25)
      • engineered (28-30)
      • engineered (73)
      • engineered (78)
      • engineered (81)
      • engineered (88)
    Domains in SCOP 1.73: d1u15a_
  • Chain 'B':
    Compound: delta crystallin I
    Species: Anas platyrhynchos
    Database cross-references and differences (RAF-indexed):
    • Uniprot P24057 (Start-465)
      • engineered (21-22)
      • engineered (24-25)
      • engineered (28-30)
      • engineered (73)
      • engineered (78)
      • engineered (81)
      • engineered (88)
    Domains in SCOP 1.73: d1u15b_
  • Chain 'C':
    Compound: delta crystallin I
    Species: Anas platyrhynchos
    Database cross-references and differences (RAF-indexed):
    • Uniprot P24057
      • engineered (21-22)
      • engineered (24-25)
      • engineered (28-30)
      • engineered (73)
      • engineered (78)
      • engineered (81)
      • engineered (88)
    Domains in SCOP 1.73: d1u15c_
  • Chain 'D':
    Compound: delta crystallin I
    Species: Anas platyrhynchos
    Database cross-references and differences (RAF-indexed):
    • Uniprot P24057 (Start-465)
      • engineered (21-22)
      • engineered (24-25)
      • engineered (28-30)
      • engineered (73)
      • engineered (78)
      • engineered (81)
      • engineered (88)
    Domains in SCOP 1.73: d1u15d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1u15A (A:)
    masegdklmggrfvgstdpimeklnssiaydqrlsevdiqasiayakalekagiltktel
    ekilsglekiseewskgvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtd
    lklfmknslsiisthllqliktlveraaieidvilpgythlqkaqpirwsqfllshaval
    trdserlgevkkrinvlplgsgalagnpldidremlrselefasislnsmdaiserdfvv
    eflsvatlllihlskmaedliiystsefgfltlsdafstgsslmpqkknpdslelirska
    grvfgrlasilmvlkglpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenm
    ekaltpemlatdlalylvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplf
    ssdvsqvfnfvnsveqytalggtakssvttqieqlrelmkkqkeqahhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1u15A (A:)
    tdpimeklnssiaydqrlsevdiqasiayakalekagiltktelekilsglekiseewsk
    gvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtdlklfmknslsiisthl
    lqliktlveraaieidvilpgythlqkaqpirwsqfllshavaltrdserlgevkkrinv
    lplgsgalagnpldidremlrselefasislnsmdaiserdfvveflsvatlllihlskm
    aedliiystsefgfltlsdafstgsslmpqkknpdslelirskagrvfgrlasilmvlkg
    lpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenmekaltpemlatdlaly
    lvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplfssdvsqvfnfvnsveq
    ytalggtakssvttqieqlrelmkkqkeq
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1u15B (B:)
    masegdklmggrfvgstdpimeklnssiaydqrlsevdiqasiayakalekagiltktel
    ekilsglekiseewskgvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtd
    lklfmknslsiisthllqliktlveraaieidvilpgythlqkaqpirwsqfllshaval
    trdserlgevkkrinvlplgsgalagnpldidremlrselefasislnsmdaiserdfvv
    eflsvatlllihlskmaedliiystsefgfltlsdafstgsslmpqkknpdslelirska
    grvfgrlasilmvlkglpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenm
    ekaltpemlatdlalylvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplf
    ssdvsqvfnfvnsveqytalggtakssvttqieqlrelmkkqkeqahhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1u15B (B:)
    tdpimeklnssiaydqrlsevdiqasiayakalekagiltktelekilsglekiseewsk
    gvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtdlklfmknslsiisthl
    lqliktlveraaieidvilpgythlqkaqpirwsqfllshavaltrdserlgevkkrinv
    lplgsgalagnpldidremlrselefasislnsmdaiserdfvveflsvatlllihlskm
    aedliiystsefgfltlsdafstgsslmpqkknpdslelirskagrvfgrlasilmvlkg
    lpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenmekaltpemlatdlaly
    lvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplfssdvsqvfnfvnsveq
    ytalggtakssvttqieqlrelmkkqkeqa
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1u15C (C:)
    masegdklmggrfvgstdpimeklnssiaydqrlsevdiqasiayakalekagiltktel
    ekilsglekiseewskgvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtd
    lklfmknslsiisthllqliktlveraaieidvilpgythlqkaqpirwsqfllshaval
    trdserlgevkkrinvlplgsgalagnpldidremlrselefasislnsmdaiserdfvv
    eflsvatlllihlskmaedliiystsefgfltlsdafstgsslmpqkknpdslelirska
    grvfgrlasilmvlkglpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenm
    ekaltpemlatdlalylvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplf
    ssdvsqvfnfvnsveqytalggtakssvttqieqlrelmkkqkeqahhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1u15C (C:)
    tdpimeklnssiaydqrlsevdiqasiayakalekagiltktelekilsglekiseewsk
    gvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtdlklfmknslsiisthl
    lqliktlveraaieidvilpgythlqkaqpirwsqfllshavaltrdserlgevkkrinv
    lplgsgalagnpldidremlrselefasislnsmdaiserdfvveflsvatlllihlskm
    aedliiystsefgfltlsdafstgsslmpqkknpdslelirskagrvfgrlasilmvlkg
    lpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenmekaltpemlatdlaly
    lvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplfssdvsqvfnfvnsveq
    ytalggtakssvttqieqlrelmkkqke
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1u15D (D:)
    masegdklmggrfvgstdpimeklnssiaydqrlsevdiqasiayakalekagiltktel
    ekilsglekiseewskgvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtd
    lklfmknslsiisthllqliktlveraaieidvilpgythlqkaqpirwsqfllshaval
    trdserlgevkkrinvlplgsgalagnpldidremlrselefasislnsmdaiserdfvv
    eflsvatlllihlskmaedliiystsefgfltlsdafstgsslmpqkknpdslelirska
    grvfgrlasilmvlkglpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenm
    ekaltpemlatdlalylvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplf
    ssdvsqvfnfvnsveqytalggtakssvttqieqlrelmkkqkeqahhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1u15D (D:)
    tdpimeklnssiaydqrlsevdiqasiayakalekagiltktelekilsglekiseewsk
    gvfvvkqsdedihtanerrlkeligdiagklhtgrsrneqvvtdlklfmknslsiisthl
    lqliktlveraaieidvilpgythlqkaqpirwsqfllshavaltrdserlgevkkrinv
    lplgsgalagnpldidremlrselefasislnsmdaiserdfvveflsvatlllihlskm
    aedliiystsefgfltlsdafstgsslmpqkknpdslelirskagrvfgrlasilmvlkg
    lpstynkdlqedkeavidvvdtltavlqvatgvistlqiskenmekaltpemlatdlaly
    lvrkgmpfrqahtasgkavhlaetkgiainnltledlksisplfssdvsqvfnfvnsveq
    ytalggtakssvttqieqlrelmkkqkeqa