PDB entry 1tzy

View 1tzy on RCSB PDB site
Description: Crystal Structure of the Core-Histone Octamer to 1.90 Angstrom Resolution
Class: DNA binding protein
Keywords: Histone-fold, tetramer-dimer-dimer, DNA BINDING PROTEIN
Deposited on 2004-07-12, released 2004-08-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.188
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: histone h2a-IV
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzya_
  • Chain 'B':
    Compound: histone h2b
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzyb_
  • Chain 'C':
    Compound: histone h3
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzyc_
  • Chain 'D':
    Compound: histone h4-vi
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzyd_
  • Chain 'E':
    Compound: histone h2a-IV
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzye_
  • Chain 'F':
    Compound: histone h2b
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzyf_
  • Chain 'G':
    Compound: histone h3
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzyg_
  • Chain 'H':
    Compound: histone h4-vi
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tzyh_
  • Heterogens: PO4, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1tzyA (A:)
msgrgkqggkarakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleylt
aeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkk
tdshkakak

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyA (A:)
kaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaard
nkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1tzyB (B:)
mpepaksapapkkgskkavtktqkkgdkkrkksrkesysiyvykvlkqvhpdtgisskam
gimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavt
kytssk

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyB (B:)
rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsr
eiqtavrlllpgelakhavsegtkavtkytss

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1tzyC (C:)
martkqtarkstggkaprkqlatkaarksapatggvkkphryrpgtvalreirryqkste
llirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvti
mpkdiqlarrirgera

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyC (C:)
yrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseayl
vglfedtnlcaihakrvtimpkdiqlarrirgera

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1tzyD (D:)
msgrgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlk
vflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyD (D:)
kvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrk
tvtamdvvyalkrqgrtlygfgg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1tzyE (E:)
msgrgkqggkarakaksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleylt
aeilelagnaardnkktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllpkk
tdshkakak

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyE (E:)
aksrssraglqfpvgrvhrllrkgnyaervgagapvylaavleyltaeilelagnaardn
kktriiprhlqlairndeelnkllgkvtiaqggvlpniqavllp

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1tzyF (F:)
mpepaksapapkkgskkavtktqkkgdkkrkksrkesysiyvykvlkqvhpdtgisskam
gimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavt
kytssk

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyF (F:)
rkesysiyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsr
eiqtavrlllpgelakhavsegtkavtkytssk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1tzyG (G:)
martkqtarkstggkaprkqlatkaarksapatggvkkphryrpgtvalreirryqkste
llirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlcaihakrvti
mpkdiqlarrirgera

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyG (G:)
phryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqease
aylvglfedtnlcaihakrvtimpkdiqlarrirgera

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1tzyH (H:)
msgrgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlk
vflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >1tzyH (H:)
rkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakr
ktvtamdvvyalkrqgrtlygfgg