PDB entry 1to5

View 1to5 on RCSB PDB site
Description: Structure of the cytosolic Cu,Zn SOD from S. mansoni
Class: oxidoreductase
Keywords: beta-barrel, OXIDOREDUCTASE
Deposited on 2004-06-12, released 2004-08-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.176
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: superoxide dismutase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: SOD
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q01137 (3-155)
      • cloning artifact (0-2)
    Domains in SCOPe 2.08: d1to5a1, d1to5a2
  • Chain 'B':
    Compound: superoxide dismutase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: SOD
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q01137 (3-155)
      • cloning artifact (0-2)
    Domains in SCOPe 2.08: d1to5b1, d1to5b2
  • Chain 'C':
    Compound: superoxide dismutase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: SOD
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q01137 (3-155)
      • cloning artifact (0-2)
    Domains in SCOPe 2.08: d1to5c1, d1to5c2
  • Chain 'D':
    Compound: superoxide dismutase
    Species: Schistosoma mansoni [TaxId:6183]
    Gene: SOD
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q01137 (3-155)
      • cloning artifact (0-2)
    Domains in SCOPe 2.08: d1to5d1, d1to5d2
  • Heterogens: ZN, CU, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1to5A (A:)
gsnmkavcvmtgtagvkgvvkftqetdngpvhvhaefsglkagkhgfhvhefgdttngct
sagahfnptkqehgapedsirhvgdlgnvvagadgnavynatdklislngshsiigrsmv
iheneddlgrgghelskvtgnaggrlacgvvglaae

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1to5B (B:)
gsnmkavcvmtgtagvkgvvkftqetdngpvhvhaefsglkagkhgfhvhefgdttngct
sagahfnptkqehgapedsirhvgdlgnvvagadgnavynatdklislngshsiigrsmv
iheneddlgrgghelskvtgnaggrlacgvvglaae

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1to5C (C:)
gsnmkavcvmtgtagvkgvvkftqetdngpvhvhaefsglkagkhgfhvhefgdttngct
sagahfnptkqehgapedsirhvgdlgnvvagadgnavynatdklislngshsiigrsmv
iheneddlgrgghelskvtgnaggrlacgvvglaae

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1to5D (D:)
gsnmkavcvmtgtagvkgvvkftqetdngpvhvhaefsglkagkhgfhvhefgdttngct
sagahfnptkqehgapedsirhvgdlgnvvagadgnavynatdklislngshsiigrsmv
iheneddlgrgghelskvtgnaggrlacgvvglaae