PDB entry 1tlb

View 1tlb on RCSB PDB site
Description: Yeast coproporphyrinogen oxidase
Class: oxidoreductase
Keywords: coproporphyrinogen oxidase, heme biosynthesis, enzyme, oxidoreductase
Deposited on 2004-06-09, released 2004-07-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.212
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Coproporphyrinogen III oxidase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HEM13, YDR044W, YD5112.02
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tlba_
  • Chain 'D':
    Compound: Coproporphyrinogen III oxidase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HEM13, YDR044W, YD5112.02
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tlbd_
  • Chain 'Q':
    Compound: Coproporphyrinogen III oxidase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HEM13, YDR044W, YD5112.02
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tlbq_
  • Chain 'S':
    Compound: Coproporphyrinogen III oxidase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HEM13, YDR044W, YD5112.02
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tlbs_
  • Chain 'U':
    Compound: Coproporphyrinogen III oxidase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HEM13, YDR044W, YD5112.02
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tlbu_
  • Chain 'W':
    Compound: Coproporphyrinogen III oxidase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: HEM13, YDR044W, YD5112.02
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tlbw_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1tlbA (A:)
    apqdprnlpirqqmealirrkqaeitqglesidtvkfhadtwtrgndggggtsmviqdgt
    tfekggvnvsvvygqlspaavsamkadhknlrlpedpktglpvtdgvkffacglsmvihp
    vnphaptthlnyryfetwnqdgtpqtwwfgggadltpsylyeedgqlfhqlhkdaldkhd
    talyprfkkwcdeyfyithrketrgiggiffddyderdpqeilkmvedcfdaflpsylti
    vkrrkdmpytkeeqqwqairrgryvefnliydrgtqfglrtpgsrvesilmslpehaswl
    ynhhpapgsreakllevttkprewvk
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1tlbD (D:)
    apqdprnlpirqqmealirrkqaeitqglesidtvkfhadtwtrgndggggtsmviqdgt
    tfekggvnvsvvygqlspaavsamkadhknlrlpedpktglpvtdgvkffacglsmvihp
    vnphaptthlnyryfetwnqdgtpqtwwfgggadltpsylyeedgqlfhqlhkdaldkhd
    talyprfkkwcdeyfyithrketrgiggiffddyderdpqeilkmvedcfdaflpsylti
    vkrrkdmpytkeeqqwqairrgryvefnliydrgtqfglrtpgsrvesilmslpehaswl
    ynhhpapgsreakllevttkprewvk
    

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1tlbQ (Q:)
    apqdprnlpirqqmealirrkqaeitqglesidtvkfhadtwtrgndggggtsmviqdgt
    tfekggvnvsvvygqlspaavsamkadhknlrlpedpktglpvtdgvkffacglsmvihp
    vnphaptthlnyryfetwnqdgtpqtwwfgggadltpsylyeedgqlfhqlhkdaldkhd
    talyprfkkwcdeyfyithrketrgiggiffddyderdpqeilkmvedcfdaflpsylti
    vkrrkdmpytkeeqqwqairrgryvefnliydrgtqfglrtpgsrvesilmslpehaswl
    ynhhpapgsreakllevttkprewvk
    

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1tlbS (S:)
    apqdprnlpirqqmealirrkqaeitqglesidtvkfhadtwtrgndggggtsmviqdgt
    tfekggvnvsvvygqlspaavsamkadhknlrlpedpktglpvtdgvkffacglsmvihp
    vnphaptthlnyryfetwnqdgtpqtwwfgggadltpsylyeedgqlfhqlhkdaldkhd
    talyprfkkwcdeyfyithrketrgiggiffddyderdpqeilkmvedcfdaflpsylti
    vkrrkdmpytkeeqqwqairrgryvefnliydrgtqfglrtpgsrvesilmslpehaswl
    ynhhpapgsreakllevttkprewvk
    

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1tlbU (U:)
    apqdprnlpirqqmealirrkqaeitqglesidtvkfhadtwtrgndggggtsmviqdgt
    tfekggvnvsvvygqlspaavsamkadhknlrlpedpktglpvtdgvkffacglsmvihp
    vnphaptthlnyryfetwnqdgtpqtwwfgggadltpsylyeedgqlfhqlhkdaldkhd
    talyprfkkwcdeyfyithrketrgiggiffddyderdpqeilkmvedcfdaflpsylti
    vkrrkdmpytkeeqqwqairrgryvefnliydrgtqfglrtpgsrvesilmslpehaswl
    ynhhpapgsreakllevttkprewvk
    

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1tlbW (W:)
    apqdprnlpirqqmealirrkqaeitqglesidtvkfhadtwtrgndggggtsmviqdgt
    tfekggvnvsvvygqlspaavsamkadhknlrlpedpktglpvtdgvkffacglsmvihp
    vnphaptthlnyryfetwnqdgtpqtwwfgggadltpsylyeedgqlfhqlhkdaldkhd
    talyprfkkwcdeyfyithrketrgiggiffddyderdpqeilkmvedcfdaflpsylti
    vkrrkdmpytkeeqqwqairrgryvefnliydrgtqfglrtpgsrvesilmslpehaswl
    ynhhpapgsreakllevttkprewvk