PDB entry 1tjj
View 1tjj on RCSB PDB site
Description: Human GM2 Activator Protein PAF complex
Class: signaling protein
Keywords: platelet activating factor,
lipid binding pocket,
beta-cup topology,
protein dynamics
Deposited on
2004-06-04, released
2004-12-07
The last revision prior to the SCOP 1.73 freeze date was dated
2004-12-07, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.189
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ganglioside GM2 activator
Species: HOMO SAPIENS
Gene: GM2A
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1tjja_ - Chain 'B':
Compound: Ganglioside GM2 activator
Species: HOMO SAPIENS
Gene: GM2A
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1tjjb_ - Chain 'C':
Compound: Ganglioside GM2 activator
Species: HOMO SAPIENS
Gene: GM2A
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1tjjc_ - Heterogens: ACT, CL, EPE, PFS, LPE, DAO, IPA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1tjjA (A:)
hmssfswdncdegkdpavirsltlepdpivvpgnvtlsvvgstsvplssplkvdlvleke
vaglwikipctdyigsctfehfcdvldmliptgepcpeplrtyglpchcpfkegtyslpk
sefvvpdlelpswlttgnyriesvlsssgkrlgcikiaaslkgi
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1tjjB (B:)
hmssfswdncdegkdpavirsltlepdpivvpgnvtlsvvgstsvplssplkvdlvleke
vaglwikipctdyigsctfehfcdvldmliptgepcpeplrtyglpchcpfkegtyslpk
sefvvpdlelpswlttgnyriesvlsssgkrlgcikiaaslkgi
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1tjjC (C:)
hmssfswdncdegkdpavirsltlepdpivvpgnvtlsvvgstsvplssplkvdlvleke
vaglwikipctdyigsctfehfcdvldmliptgepcpeplrtyglpchcpfkegtyslpk
sefvvpdlelpswlttgnyriesvlsssgkrlgcikiaaslkgi
Sequence, based on observed residues (ATOM records): (download)
>1tjjC (C:)
mssfswdncdegkdpavirsltlepdpivvpgnvtlsvvgstsvplssplkvdlvlekev
aglwikipctdyigsctfehfcdvldmliptgepcpeplrtyglpchcpfkegtyslpks
efvvpdlelpswlttgnyriesvlsssgkrlgcikiaaslkgi