PDB entry 1tfy

View 1tfy on RCSB PDB site
Description: How CCA is added to the 3' end of immature tRNA without the use of an oligonucleotide template
Class: transferase/RNA
Keywords: CCA-adding Complex, CTP, TRANSFERASE-RNA COMPLEX
Deposited on 2004-05-27, released 2004-08-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.238
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tRNA nucleotidyltransferase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: CCA, AF2156
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tfya1, d1tfya2, d1tfya3
  • Chain 'B':
    Compound: tRNA nucleotidyltransferase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: CCA, AF2156
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tfyb1, d1tfyb2, d1tfyb3
  • Chain 'C':
    Compound: tRNA nucleotidyltransferase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: CCA, AF2156
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tfyc1, d1tfyc2, d1tfyc3
  • Chain 'D':
    Compound: tRNA nucleotidyltransferase
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Gene: CCA, AF2156
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1tfyd1, d1tfyd2, d1tfyd3
  • Chain 'E':
    Compound: 5'-r(*gp*cp*gp*gp*ap*up*ap*up*cp*cp*gp*cp*g)-3'
  • Chain 'F':
    Compound: 5'-r(*gp*cp*gp*gp*ap*up*ap*up*cp*cp*gp*cp*g)-3'
  • Chain 'G':
    Compound: 5'-r(*cp*gp*gp*ap*up*cp*cp*gp*cp*ap*c)-3'
  • Chain 'H':
    Compound: 5'-r(*gp*cp*gp*gp*ap*up*ap*up*cp*cp*gp*cp*ap*c)-3'
  • Chain 'I':
    Compound: 5'-r(*gp*cp*gp*gp*ap*up*ap*up*cp*cp*gp*cp*ap*c)-3'
  • Chain 'J':
    Compound: 5'-r(*cp*gp*cp*gp*gp*ap*up*c)-3'
  • Heterogens: MG, CTP

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1tfyA (A:)
mkveeilekalelvipdeeevrkgreaeeelrrrldelgveyvfvgsyarntwlkgslei
dvfllfpeefskeelrergleigkavldsyeiryaehpyvhgvvkgvevdvvpcyklkep
kniksavdrtpfhhkwlegrikgkenevrllkgflkangiygaeykvrgfsgylcelliv
fygsfletvknarrwtrrtvidvakgevrkgeeffvvdpvdekrnvaanlsldnlarfvh
lcrefmeapslgffkpkhpleieperlrkiveergtavfavkfrkpdivddnlypqlera
srkifeflerenfmplrsafkaseefcyllfecqikeisrvfrrmgpqfedernvkkfls
rnrafrpfiengrwwafemrkfttpeegvrsyasthwhtlgknvgesireyfeiisgekl
fkepvtaelcemmgvkd

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1tfyB (B:)
mkveeilekalelvipdeeevrkgreaeeelrrrldelgveyvfvgsyarntwlkgslei
dvfllfpeefskeelrergleigkavldsyeiryaehpyvhgvvkgvevdvvpcyklkep
kniksavdrtpfhhkwlegrikgkenevrllkgflkangiygaeykvrgfsgylcelliv
fygsfletvknarrwtrrtvidvakgevrkgeeffvvdpvdekrnvaanlsldnlarfvh
lcrefmeapslgffkpkhpleieperlrkiveergtavfavkfrkpdivddnlypqlera
srkifeflerenfmplrsafkaseefcyllfecqikeisrvfrrmgpqfedernvkkfls
rnrafrpfiengrwwafemrkfttpeegvrsyasthwhtlgknvgesireyfeiisgekl
fkepvtaelcemmgvkd

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1tfyC (C:)
mkveeilekalelvipdeeevrkgreaeeelrrrldelgveyvfvgsyarntwlkgslei
dvfllfpeefskeelrergleigkavldsyeiryaehpyvhgvvkgvevdvvpcyklkep
kniksavdrtpfhhkwlegrikgkenevrllkgflkangiygaeykvrgfsgylcelliv
fygsfletvknarrwtrrtvidvakgevrkgeeffvvdpvdekrnvaanlsldnlarfvh
lcrefmeapslgffkpkhpleieperlrkiveergtavfavkfrkpdivddnlypqlera
srkifeflerenfmplrsafkaseefcyllfecqikeisrvfrrmgpqfedernvkkfls
rnrafrpfiengrwwafemrkfttpeegvrsyasthwhtlgknvgesireyfeiisgekl
fkepvtaelcemmgvkd

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1tfyD (D:)
mkveeilekalelvipdeeevrkgreaeeelrrrldelgveyvfvgsyarntwlkgslei
dvfllfpeefskeelrergleigkavldsyeiryaehpyvhgvvkgvevdvvpcyklkep
kniksavdrtpfhhkwlegrikgkenevrllkgflkangiygaeykvrgfsgylcelliv
fygsfletvknarrwtrrtvidvakgevrkgeeffvvdpvdekrnvaanlsldnlarfvh
lcrefmeapslgffkpkhpleieperlrkiveergtavfavkfrkpdivddnlypqlera
srkifeflerenfmplrsafkaseefcyllfecqikeisrvfrrmgpqfedernvkkfls
rnrafrpfiengrwwafemrkfttpeegvrsyasthwhtlgknvgesireyfeiisgekl
fkepvtaelcemmgvkd

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.